C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spire homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045105 Spire1-201 ENSMUSG00000024533 10090 - 18:67488209-67552721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyOvaryPlacentaTestisENSMUST00000045105
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Ovary Placenta Testis
ENSMUST00000045105 0.834±0.29 0.788±0.40 1.086±0.40 0.836±0.41 0.403±0.11 4.044±1.79 1.032±0.50 1.218±0.38 0.441±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0002 VISTA 18:67068230-67671525
CIL_00010Z CIL_00010Z_0002 CGP 18:67464849-67552777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005794 IDA Golgi apparatus
GO:0030036 IEA actin cytoskeleton organization
GO:0048193 IDA Golgi vesicle transport
GO:0051295 IEA establishment of meiotic spindle localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309836 SPIRE1-005 protein_coding Homo_sapiens 0 1140
ENST00000409402 SPIRE1-001 protein_coding Homo_sapiens 0 848
ENST00000410092 SPIRE1-002 protein_coding Homo_sapiens 0 1256
ENST00000440472 SPIRE1-003 nonsense_mediated_decay Homo_sapiens 0 1256
ENST00000449797 SPIRE1-006 protein_coding Homo_sapiens 0 534
ENST00000453447 SPIRE1-010 protein_coding Homo_sapiens 0 1256
ENST00000462226 SPIRE1-004 protein_coding Homo_sapiens 0 267
ENST00000464481 SPIRE1-008 processed_transcript Homo_sapiens 0 1555
ENST00000487491 SPIRE1-007 processed_transcript Homo_sapiens 0 499
ENST00000497844 SPIRE1-011 protein_coding Homo_sapiens 0 294
ENST00000498803 SPIRE1-009 retained_intron Homo_sapiens 0 520
ENST00000588236 SPIRE1-013 retained_intron Homo_sapiens 0 584
ENST00000592156 SPIRE1-012 nonsense_mediated_decay Homo_sapiens 0 763

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