C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spire-type actin nucleation factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409402 SPIRE1-001 ENSG00000134278 9606 - 18:12446512-12658134 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonOvaryENST00000409402
Transcript ID Brain Breast Colon Ovary
ENST00000409402 4.884±0.00 1.679±0.00 1.809±0.00 3.159±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0001 VISTA 18:11977697-12581651
CIL_00010Z CIL_00010Z_0001 CGP 18:12407896-12658134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005794 IEA Golgi apparatus
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005938 ISS cell cortex
GO:0015031 IEA protein transport
GO:0016192 ISS vesicle-mediated transport
GO:0030036 IMP actin cytoskeleton organization
GO:0030659 ISS cytoplasmic vesicle membrane
GO:0032154 ISS cleavage furrow
GO:0036089 ISS cleavage furrow formation
GO:0040038 ISS polar body extrusion after meiotic divisions
GO:0046907 ISS intracellular transport
GO:0048193 IEA Golgi vesicle transport
GO:0051295 IMP establishment of meiotic spindle localization
GO:0070649 ISS formin-nucleated actin cable assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082243 Spire1-202 protein_coding Mus_musculus 0 2196
ENSMUST00000115050 Spire1-203 protein_coding Mus_musculus 0 1240
ENSMUST00000045105 Spire1-201 protein_coding Mus_musculus 0 848
ENSDART00000128229 CR524823.3-201 protein_coding Danio_rerio 2e-22 113

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