C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosome production factor 2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045114 Rpf2-001 ENSMUSG00000038510 10090 - 10:40223246-40247002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENSMUST00000045114
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000045114 0.440±0.31 0.853±0.36 1.123±0.00 0.381±0.06 0.731±0.15 0.395±0.00 0.101±0.02 0.204±0.04 0.429±0.00 0.960±0.48 1.437±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FT CIL_0002FT_0002 CGP 10:40033535-40247036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368864 RPF2-002 nonsense_mediated_decay Homo_sapiens 0 767
ENST00000424137 RPF2P1-001 processed_pseudogene Homo_sapiens 0 996
ENST00000425871 RPF2-003 protein_coding Homo_sapiens 0 929
ENST00000441448 RPF2-001 protein_coding Homo_sapiens 0 1133
ENST00000607388 RPF2-004 nonsense_mediated_decay Homo_sapiens 0 928

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