C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ZXD family zinc finger C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045740 Zxdc-201 ENSMUSG00000034430 10090 + 6:90369494-90385394 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverLungMuscleOvaryENSMUST00000045740
Transcript ID Brain Heart Liver Lung Muscle Ovary
ENSMUST00000045740 1.212±0.68 0.426±0.00 0.451±0.11 1.080±0.00 0.400±0.03 1.434±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032O CIL_00032O_0002 CGP 6:90369492-90428797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0030275 ISS LRR domain binding
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0070742 ISS C2H2 zinc finger domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336332 ZXDC-002 protein_coding Homo_sapiens 0 1694
ENST00000358697 ZXDA-001 protein_coding Homo_sapiens 0 819
ENST00000374888 ZXDB-001 protein_coding Homo_sapiens 0 841
ENST00000389709 ZXDC-001 protein_coding Homo_sapiens 0 1640
ENST00000515545 ZXDC-003 nonsense_mediated_decay Homo_sapiens 0 1203

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