C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, X-linked, duplicated A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358697 ZXDA-001 ENSG00000198205 9606 - X:57906708-57910820 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358697
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358697 0.725±0.00 0.831±0.00 0.602±0.00 0.827±0.22 1.219±0.52 0.716±0.10 0.362±0.00 0.604±0.10 0.824±0.61 0.618±0.27 0.398±0.13 0.430±0.06 0.216±0.07 0.361±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057E CIL_00057E_0001 CGP X:57906708-63351344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0070742 IPI C2H2 zinc finger domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101388 Zxdb-001 protein_coding Mus_musculus 0 1552
ENSMUST00000117281 Zxda-001 unprocessed_pseudogene Mus_musculus 0 1546
ENSMUST00000045740 Zxdc-201 protein_coding Mus_musculus 0 819
ENSMUST00000075117 Zxdc-001 protein_coding Mus_musculus 0 819
ENSMUST00000113539 Zxdc-003 protein_coding Mus_musculus 0 819
ENSMUST00000137483 Zxdc-002 retained_intron Mus_musculus 0 514

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