C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045918 Alg3-001 ENSMUSG00000033809 10090 - 16:20605451-20610768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045918
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045918 9.132±1.12 16.936±2.09 4.651±0.91 8.155±0.44 8.286±1.54 9.166±1.60 4.497±0.33 7.784±0.48 7.639±1.89 7.323±0.60 4.734±0.71 10.933±4.12 5.863±3.81 4.886±2.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FO CIL_0005FO_0002 CGP 16:20589471-20610768
CIL_000573 CIL_000573_0002 CGP 16:20605451-20646485

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000033 IEA alpha-1,3-mannosyltransferase activity
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0052925 IEA dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397676 ALG3-001 protein_coding Homo_sapiens 0 1504
ENST00000411922 ALG3-004 nonsense_mediated_decay Homo_sapiens 0 1168
ENST00000414845 ALG3-013 nonsense_mediated_decay Homo_sapiens 0 564
ENST00000423996 ALG3-007 nonsense_mediated_decay Homo_sapiens 0 833
ENST00000445626 ALG3-002 protein_coding Homo_sapiens 0 1288
ENST00000446569 ALG3-014 protein_coding Homo_sapiens 0 990
ENST00000455059 ALG3-003 protein_coding Homo_sapiens 0 1288
ENST00000461415 ALG3-006 retained_intron Homo_sapiens 0 451
ENST00000462735 ALG3-010 retained_intron Homo_sapiens 0 464
ENST00000477959 ALG3-009 retained_intron Homo_sapiens 0 307
ENST00000482048 ALG3-008 retained_intron Homo_sapiens 0 643
ENST00000485912 ALG3-012 retained_intron Homo_sapiens 0 381
ENST00000488976 ALG3-005 retained_intron Homo_sapiens 0 331
ENST00000508806 ALG3P1-001 processed_pseudogene Homo_sapiens 0 880

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