C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ALG3, alpha-1,3- mannosyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397676 ALG3-001 ENSG00000214160 9606 - 3:184242334-184248971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397676
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397676 3.644±0.00 9.821±0.00 2.118±0.71 6.587±0.00 4.358±3.65 1.493±0.00 7.118±0.00 14.340±0.00 2.611±1.28 3.213±0.00 12.478±7.61 21.850±13.77 11.349±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0001 CGP 3:184135038-184684758
CIL_0005FP CIL_0005FP_0001 CGP 3:184186023-184242329
CIL_0005FO CIL_0005FO_0001 CGP 3:184230429-184249548
CIL_000573 CIL_000573_0001 CGP 3:184242301-184293031

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000033 IDA alpha-1,3-mannosyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006486 NAS protein glycosylation
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0052925 IEA dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045918 Alg3-001 protein_coding Mus_musculus 0 1504
ENSMUST00000123774 Alg3-002 nonsense_mediated_decay Mus_musculus 0 1168
ENSMUST00000127454 Alg3-004 nonsense_mediated_decay Mus_musculus 0 841

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