C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 34
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045994 Rbm34-201 ENSMUSG00000033931 10090 - 8:126947175-126971079 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045994
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045994 1.363±0.42 3.698±1.33 2.206±0.28 2.096±1.19 1.581±0.81 1.900±0.60 0.356±0.06 2.917±0.94 1.408±0.43 1.269±0.35 1.453±0.17 2.070±1.19 5.028±1.63 1.083±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KF CIL_0006KF_0002 CGP 8:126930664-126971079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000408888 RBM34-001 protein_coding Homo_sapiens 0 776
ENST00000447801 RBM34-010 protein_coding Homo_sapiens 0 547
ENST00000474953 ARID4B-012 nonsense_mediated_decay Homo_sapiens 0 776
ENST00000495224 RBM34-009 processed_transcript Homo_sapiens 0 363

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