C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006KF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173726-ENSG00000188739 CGP 9606 1:235109336-235161457
GeneTranscriptPositionBiotype
ENSG00000054267 (ARID4B)
AT rich interactive domain 4B (RBP1-like) 		ENST00000264183 (ARID4B-201) 235166895-235328217 protein_coding
ENST00000349213 (ARID4B-001) 235166895-235328219 protein_coding
ENST00000366603 (ARID4B-004) 235166895-235327487 protein_coding
ENST00000418304 (ARID4B-007) 235219927-235328196 protein_coding
ENST00000421364 (ARID4B-010) 235167884-235328134 nonsense_mediated_decay
ENST00000444620 (ARID4B-006) 235177787-235213916 protein_coding
ENST00000462969 (ARID4B-008) 235326791-235327863 retained_intron
ENST00000466653 (ARID4B-002) 235228311-235328217 retained_intron
ENST00000471257 (ARID4B-003) 235180139-235234492 retained_intron
ENST00000474401 (ARID4B-011) 235172647-235175643 retained_intron
ENST00000474953 (ARID4B-012) 235131634-235194077 nonsense_mediated_decay
ENST00000491632 (ARID4B-005) 235177616-235328168 retained_intron
ENST00000494543 (ARID4B-009) 235177856-235181865 processed_transcript
ENSG00000173726 (TOMM20)
translocase of outer mitochondrial membrane 20 homolog (yeast) 		ENST00000366607 (TOMM20-001) 235109336-235128936 protein_coding
ENST00000467767 (TOMM20-003) 235112025-235119899 processed_transcript
ENST00000473132 (TOMM20-002) 235112103-235122459 processed_transcript
ENSG00000188739 (RBM34)
RNA binding motif protein 34 		ENST00000408888 (RBM34-001) 235131183-235161457 protein_coding
ENST00000429912 (RBM34-004) 235154930-235161258 protein_coding
ENST00000447801 (RBM34-010) 235131667-235161220 protein_coding
ENST00000468751 (RBM34-006) 235154881-235161171 retained_intron
ENST00000474086 (RBM34-005) 235135649-235161234 nonsense_mediated_decay
ENST00000475960 (RBM34-007) 235155088-235160962 retained_intron
ENST00000476261 (RBM34-002) 235152488-235161232 retained_intron
ENST00000485019 (RBM34-008) 235160195-235161216 processed_transcript
ENST00000486751 (RBM34-003) 235160150-235161283 retained_intron
ENST00000495224 (RBM34-009) 235131649-235136114 processed_transcript
ENSG00000207181 (SNORA14B)
small nucleolar RNA, H/ACA box 14B 		ENST00000384452 (SNORA14B-201) 235127803-235127937 snoRNA
CIL_0006KF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000093904-ENSMUSG00000033931 CGP 10090 8:126930664-126971079
GeneTranscriptPositionBiotype
ENSMUSG00000033931 (Rbm34)
RNA binding motif protein 34 		ENSMUST00000045994 (Rbm34-201) 126947175-126971079 protein_coding
ENSMUSG00000065637 (Gm26397)
predicted gene, 26397 		ENSMUST00000083703 (Gm26397-201) 126944847-126944980 snoRNA
ENSMUSG00000093904 (Tomm20)
translocase of outer mitochondrial membrane 20 homolog (yeast) 		ENSMUST00000179857 (Tomm20-201) 126930664-126945921 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KF_0001ENSG00000054267ENST00000264183ENST00000349213ENST00000366603ENST00000418304ENST00000421364ENST00000444620ENST00000462969ENST00000466653ENST00000471257ENST00000474401ENST00000474953ENST00000491632ENST00000494543ENSG00000173726ENST00000366607ENST00000467767ENST00000473132ENSG00000188739ENST00000408888ENST00000429912ENST00000447801ENST00000468751ENST00000474086ENST00000475960ENST00000476261ENST00000485019ENST00000486751ENST00000495224ENSG00000207181ENST00000384452CIL_0006KF_0002ENSMUSG00000033931ENSMUST00000045994ENSMUSG00000065637ENSMUST00000083703ENSMUSG00000093904ENSMUST00000179857
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006KF_0001ENSG00000054267ENST00000264183ENST00000349213ENST00000366603ENST00000418304ENST00000421364ENST00000471257ENST00000491632ENSG00000173726ENST00000366607ENST00000473132ENSG00000188739ENST00000408888ENST00000447801ENST00000474086ENST00000495224ENSG00000207181ENST00000384452CIL_0006KF_0002ENSMUSG00000033931ENSMUST00000045994ENSMUSG00000065637ENSMUST00000083703ENSMUSG00000093904ENSMUST00000179857
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054267 ENST00000264183 5.604±0.00 13.687±0.00 1.723±0.00 4.119±2.03 3.921±0.08 4.818±2.11 1.647±0.97 10.974±0.00 4.600±0.00 3.930±0.00 N/A 4.659±1.84 4.178±2.67 11.766±0.22
ENST00000349213 N/A N/A 1.394±0.00 3.389±0.00 N/A N/A 0.404±0.00 N/A N/A 5.167±0.00 N/A 1.990±0.00 N/A N/A
ENST00000366603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.150±0.71 7.536±0.00 1.885±0.00 9.452±0.00
ENST00000418304 N/A N/A N/A N/A N/A 8.172±0.00 1.418±0.00 N/A N/A N/A N/A N/A 15.278±0.00 N/A
ENST00000421364 N/A N/A 1.465±0.00 N/A 2.468±0.00 N/A N/A N/A N/A N/A N/A 1.901±0.00 N/A N/A
ENST00000444620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.082±0.00 N/A
ENST00000474401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491632 N/A N/A N/A N/A 3.510±0.00 N/A N/A N/A 3.754±0.00 N/A N/A N/A N/A 10.179±0.00
ENST00000494543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173726 ENST00000366607 36.805±0.00 33.610±0.00 9.632±0.00 33.250±1.05 27.198±19.83 30.215±17.58 17.802±12.44 21.026±10.68 13.761±0.28 20.648±10.43 14.358±10.24 28.226±14.39 25.937±0.74 24.415±11.05
ENST00000467767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.522±0.00 39.110±0.00 37.916±0.00
ENSG00000188739 ENST00000408888 N/A N/A N/A 4.625±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.563±0.26 N/A
ENST00000429912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447801 N/A N/A N/A N/A N/A 25.767±0.00 9.428±0.00 3.262±0.00 7.539±0.00 N/A N/A N/A N/A 29.710±0.00
ENST00000468751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474086 N/A N/A N/A N/A N/A N/A 2.974±0.00 N/A N/A N/A N/A 47.928±0.00 N/A 66.332±0.00
ENST00000475960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.946±0.00 N/A N/A N/A
ENSG00000207181 ENST00000384452 0.267±0.00 N/A N/A 49.480±48.80 29.230±0.00 4.719±0.00 0.606±0.00 4.896±0.00 48.248±0.00 N/A N/A 43.020±55.60 N/A 0.411±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033931 ENSMUST00000045994 1.363±0.42 3.698±1.33 2.206±0.28 2.096±1.19 1.581±0.81 1.900±0.60 0.356±0.06 2.917±0.94 1.408±0.43 1.269±0.35 1.453±0.17 2.070±1.19 5.028±1.63 1.083±0.46
ENSMUSG00000065637 ENSMUST00000083703 887.482±312.26 2166.540±0.00 52.942±41.45 162.153±40.07 2768.850±0.00 3024.910±1932.42 1621.730±0.00 841.260±89.89 27.221±14.86 532.090±0.00 2.392±0.52 2849.491±2351.41 66.830±40.65 844.150±0.00
ENSMUSG00000093904 ENSMUST00000179857 17.280±5.23 198.516±69.06 15.096±0.65 24.113±4.23 27.134±13.05 34.827±14.35 9.095±2.58 45.917±9.65 15.822±4.01 24.705±8.05 6.447±0.63 68.395±57.72 20.570±5.54 11.797±4.85

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