C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IKAROS family zinc finger 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046306 Ikzf5-001 ENSMUSG00000040167 10090 - 7:131388652-131410521 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000046306
Transcript ID Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000046306 5.800±0.53 7.575±0.15 1.482±0.57 1.010±0.01 5.517±3.04 2.641±0.76 2.311±1.09 2.001±1.70 1.889±1.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0008DB CIL_0008DB_0002 VISTA 7:131163946-131765852
CIL_0009A3 CIL_0009A3_0002 VISTA 7:131196657-131797909
CIL_0007QE CIL_0007QE_0002 VISTA 7:131249727-131851322
CIL_00011P CIL_00011P_0002 CGP 7:131371141-131410521
CIL_00011Q CIL_00011Q_0002 CGP 7:131388652-131446211

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368886 IKZF5-001 protein_coding Homo_sapiens 0 1796
ENST00000469821 IKZF5-004 processed_transcript Homo_sapiens 0 248
ENST00000479103 IKZF5-002 processed_transcript Homo_sapiens 0 209
ENST00000496605 IKZF5-003 processed_transcript Homo_sapiens 0 475
ENST00000617859 IKZF5-201 protein_coding Homo_sapiens 0 1796

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