C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IKAROS family zinc finger 5 (Pegasus)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368886 IKZF5-001 ENSG00000095574 9606 - 10:122990806-123008817 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverLungOvaryPlacentaTestisENST00000368886
Transcript ID Adipose Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000368886 3.305±0.00 4.134±1.84 2.561±0.00 2.279±0.78 0.839±0.10 3.734±0.00 1.899±1.14 1.492±0.14 4.860±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DB CIL_0008DB_0001 VISTA 10:122767938-123370218
CIL_0009A3 CIL_0009A3_0001 VISTA 10:122792297-123393555
CIL_0007QE CIL_0007QE_0001 VISTA 10:122843411-123445122
CIL_0002JF CIL_0002JF_0001 CGP 10:122930903-122997513
CIL_00011P CIL_00011P_0001 CGP 10:122954381-123008817
CIL_00011Q CIL_00011Q_0001 CGP 10:122990806-123058311

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046306 Ikzf5-001 protein_coding Mus_musculus 0 1796
ENSMUST00000097152 Gm10356-201 processed_pseudogene Mus_musculus 0 1681
ENSMUST00000121033 Ikzf5-002 protein_coding Mus_musculus 0 671
ENSMUST00000154602 Ikzf5-003 protein_coding Mus_musculus 0 521
ENSMUST00000128432 Ikzf5-005 protein_coding Mus_musculus 0 475

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