C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin protein ligase E3 component n-recognin 7 (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046404 Ubr7-201 ENSMUSG00000041712 10090 + 12:102757975-102777701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046404
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046404 11.338±2.54 11.830±1.17 14.868±0.21 16.041±1.96 9.532±2.27 8.180±0.36 9.276±0.33 10.838±6.60 11.926±0.70 5.634±0.36 13.796±1.66 17.075±1.79 29.678±6.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MM CIL_0003MM_0002 CGP 12:102753275-102777701
CIL_00061C CIL_00061C_0003 CGP 12:102757975-102878406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000013070 UBR7-001 protein_coding Homo_sapiens 0 1424
ENST00000416753 UBR7-201 protein_coding Homo_sapiens 0 1051
ENST00000553674 UBR7-002 nonsense_mediated_decay Homo_sapiens 0 1059
ENST00000553857 UBR7-007 protein_coding Homo_sapiens 0 538
ENST00000554232 UBR7-004 protein_coding Homo_sapiens 0 466
ENST00000555113 UBR7-005 protein_coding Homo_sapiens 0 318
ENST00000555329 UBR7-006 protein_coding Homo_sapiens 0 418
ENST00000556871 UBR7-003 protein_coding Homo_sapiens 0 259
ENST00000557048 RP11-371E8.4-001 processed_transcript Homo_sapiens 0 634
ENST00000557574 RP11-371E8.4-003 protein_coding Homo_sapiens 0 401
ENST00000611035 UBR7-202 protein_coding Homo_sapiens 0 1051
ENST00000619583 UBR7-203 protein_coding Homo_sapiens 0 1424

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