C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003MM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170270-ENSG00000012963 CGP 9606 14:93202894-93229215
GeneTranscriptPositionBiotype
ENSG00000012963 (UBR7)
ubiquitin protein ligase E3 component n-recognin 7 (putative)
ENST00000013070 (UBR7-001) 93207056-93229215 protein_coding
ENST00000416753 (UBR7-201) 93207056-93229209 protein_coding
ENST00000553674 (UBR7-002) 93207243-93227118 nonsense_mediated_decay
ENST00000553857 (UBR7-007) 93209897-93227024 protein_coding
ENST00000554232 (UBR7-004) 93207241-93218557 protein_coding
ENST00000555113 (UBR7-005) 93207294-93215199 protein_coding
ENST00000555329 (UBR7-006) 93218681-93227225 protein_coding
ENST00000556871 (UBR7-003) 93207243-93218674 protein_coding
ENSG00000170270 (C14orf142)
chromosome 14 open reading frame 142
ENST00000306954 (C14orf142-001) 93202894-93207094 protein_coding
ENST00000556566 (C14orf142-002) 93203506-93207029 protein_coding
ENSG00000240096 (RP11-85G20.1)
ENST00000469219 (RP11-85G20.1-001) 93223598-93224139 processed_pseudogene
CIL_0003MM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000091931-ENSMUSG00000041712 CGP 10090 12:102753275-102777701
GeneTranscriptPositionBiotype
ENSMUSG00000041712 (Ubr7)
ubiquitin protein ligase E3 component n-recognin 7 (putative)
ENSMUST00000046404 (Ubr7-201) 102757975-102777701 protein_coding
ENSMUSG00000041716 (Gm20604)
predicted gene 20604
ENSMUST00000174651 (Gm20604-001) 102741732-102758672 protein_coding
ENSMUSG00000091931 (AK010878)
cDNA sequence AK010878
ENSMUST00000173969 (AK010878-001) 102753275-102757800 protein_coding
ENSMUST00000179263 (AK010878-003) 102756281-102757803 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MM_0001ENSG00000012963ENST00000013070ENST00000416753ENST00000553674ENST00000553857ENST00000554232ENST00000555113ENST00000555329ENST00000556871ENSG00000170270ENST00000306954ENST00000556566ENSG00000240096ENST00000469219CIL_0003MM_0002ENSMUSG00000041712ENSMUST00000046404ENSMUSG00000041716ENSMUST00000174651ENSMUSG00000091931ENSMUST00000173969ENSMUST00000179263
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MM_0001ENSG00000012963ENST00000013070ENST00000416753ENST00000553674ENST00000555113ENSG00000170270ENST00000306954ENSG00000240096ENST00000469219CIL_0003MM_0002ENSMUSG00000041712ENSMUST00000046404ENSMUSG00000041716ENSMUST00000174651ENSMUSG00000091931ENSMUST00000173969
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000012963 ENST00000013070 3.943±0.00 2.640±0.00 0.448±0.00 3.394±0.00 2.483±0.00 2.453±0.00 3.075±0.00 2.759±0.68 2.256±0.90 1.864±0.00 2.130±0.07 4.399±1.29 5.374±2.43 12.204±4.77
ENST00000416753 3.325±0.00 N/A N/A 7.675±0.00 3.493±0.00 4.110±0.00 2.306±0.00 2.517±0.00 0.928±0.00 1.344±0.00 4.158±0.00 3.434±0.00 N/A N/A
ENST00000553674 N/A N/A 1.036±0.00 N/A 1.621±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 16.593±3.48
ENST00000553857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555113 N/A N/A 2.606±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170270 ENST00000306954 N/A 5.541±0.00 N/A N/A N/A 3.807±0.63 3.676±2.17 7.225±5.30 3.251±0.00 3.532±0.00 N/A 6.111±1.87 4.664±2.83 9.938±0.00
ENST00000556566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240096 ENST00000469219 0.305±0.00 0.271±0.00 N/A 0.131±0.00 0.120±0.00 0.162±0.00 N/A 0.237±0.00 0.101±0.00 N/A 0.240±0.00 0.191±0.07 0.368±0.00 0.346±0.19
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041712 ENSMUST00000046404 11.338±2.54 11.830±1.17 14.868±0.21 16.041±1.96 9.532±2.27 N/A 8.180±0.36 9.276±0.33 10.838±6.60 11.926±0.70 5.634±0.36 13.796±1.66 17.075±1.79 29.678±6.51
ENSMUSG00000041716 ENSMUST00000174651 N/A N/A N/A 10.562±3.28 N/A N/A 2.609±0.00 N/A 7.099±3.01 N/A 2.062±0.27 5.458±0.00 6.878±0.56 27.572±0.86
ENSMUSG00000091931 ENSMUST00000173969 N/A N/A N/A N/A N/A N/A N/A N/A 5.649±0.00 N/A 3.816±0.47 N/A 11.226±0.00 N/A
ENSMUST00000179263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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