C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complexin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046892 Cplx1-001 ENSMUSG00000033615 10090 - 5:108518554-108550024 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046892 0.046±0.03 0.599±0.27 0.083±0.04 70.194±89.29 0.081±0.03 0.466±0.13 0.165±0.07 0.115±0.00 0.009±0.00 0.053±0.03 0.058±0.05 0.250±0.11 0.376±0.47 0.329±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LT CIL_0006LT_0002 CGP 5:108461232-108550024
CIL_0006LS CIL_0006LS_0002 CGP 5:108518554-108629739

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0005326 IMP neurotransmitter transporter activity
GO:0016079 IMP synaptic vesicle exocytosis
GO:0017075 ISO syntaxin-1 binding
GO:0030073 IMP insulin secretion
GO:0030425 ISO dendrite
GO:0031201 IDA SNARE complex
GO:0043025 ISO neuronal cell body
GO:0043234 IEA protein complex
GO:0045202 ISO synapse
GO:0070032 ISO synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304062 CPLX1-001 protein_coding Homo_sapiens 0 575
ENST00000504062 CPLX1-004 protein_coding Homo_sapiens 0 394
ENST00000505203 CPLX1-003 protein_coding Homo_sapiens 2.8026e-45 187
ENST00000506404 CPLX1-005 retained_intron Homo_sapiens 0 433

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