C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006LT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185619-ENSG00000168993 CGP 9606 4:705748-826198
GeneTranscriptPositionBiotype
ENSG00000168993 (CPLX1)
complexin 1 		ENST00000304062 (CPLX1-001) 784957-826198 protein_coding
ENST00000504062 (CPLX1-004) 786531-804908 protein_coding
ENST00000505203 (CPLX1-003) 784958-826092 protein_coding
ENST00000506404 (CPLX1-005) 786390-792692 retained_intron
ENSG00000185619 (PCGF3)
polycomb group ring finger 3 		ENST00000362003 (PCGF3-001) 705765-770640 protein_coding
ENST00000400151 (PCGF3-009) 705784-734479 protein_coding
ENST00000419774 (PCGF3-007) 705748-734943 protein_coding
ENST00000427463 (PCGF3-012) 705784-735009 protein_coding
ENST00000430644 (PCGF3-003) 705832-766599 nonsense_mediated_decay
ENST00000433814 (PCGF3-005) 725107-743538 protein_coding
ENST00000440452 (PCGF3-002) 705943-767864 nonsense_mediated_decay
ENST00000470161 (PCGF3-004) 705784-766608 protein_coding
ENST00000475288 (PCGF3-006) 705782-731345 retained_intron
ENST00000482726 (PCGF3-008) 705784-734842 processed_transcript
ENST00000484141 (PCGF3-011) 705875-737540 retained_intron
ENST00000488032 (PCGF3-010) 743865-761364 processed_transcript
ENST00000505655 (PCGF3-201) 731076-767031 protein_coding
ENST00000620529 (PCGF3-202) 768189-770087 protein_coding
ENSG00000248416 (RP11-1191J2.4)
 ENST00000502923 (RP11-1191J2.4-001) 722275-724034 antisense
ENSG00000272588 (RP11-440L14.4)
 ENST00000607877 (RP11-440L14.4-001) 757022-757740 antisense
CIL_0006LT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033623-ENSMUSG00000033615 CGP 10090 5:108461232-108550024
GeneTranscriptPositionBiotype
ENSMUSG00000033615 (Cplx1)
complexin 1 		ENSMUST00000046892 (Cplx1-001) 108518554-108550024 protein_coding
ENSMUST00000129040 (Cplx1-002) 108520259-108550000 protein_coding
ENSMUSG00000033623 (Pcgf3)
polycomb group ring finger 3 		ENSMUST00000046975 (Pcgf3-001) 108461232-108506976 protein_coding
ENSMUST00000112597 (Pcgf3-002) 108461232-108489224 protein_coding
ENSMUST00000138264 (Pcgf3-003) 108461313-108486171 processed_transcript
ENSMUST00000143973 (Pcgf3-004) 108473887-108478510 processed_transcript
ENSMUST00000151897 (Pcgf3-005) 108486220-108496290 processed_transcript
ENSMUSG00000060730 (Gm10086)
predicted pseudogene 10086 		ENSMUST00000136334 (Gm10086-001) 108517179-108517532 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LT_0001ENSG00000168993ENST00000304062ENST00000504062ENST00000505203ENST00000506404ENSG00000185619ENST00000362003ENST00000400151ENST00000419774ENST00000427463ENST00000430644ENST00000433814ENST00000440452ENST00000470161ENST00000475288ENST00000482726ENST00000484141ENST00000488032ENST00000505655ENST00000620529ENSG00000248416ENST00000502923ENSG00000272588ENST00000607877CIL_0006LT_0002ENSMUSG00000033615ENSMUST00000046892ENSMUST00000129040ENSMUSG00000033623ENSMUST00000046975ENSMUST00000112597ENSMUST00000138264ENSMUST00000143973ENSMUST00000151897ENSMUSG00000060730ENSMUST00000136334
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LT_0001ENSG00000168993ENST00000304062ENST00000504062ENST00000505203ENST00000506404ENSG00000185619ENST00000362003ENST00000440452ENST00000470161ENST00000505655ENST00000620529ENSG00000248416ENST00000502923ENSG00000272588ENST00000607877CIL_0006LT_0002ENSMUSG00000033615ENSMUST00000046892ENSMUST00000129040ENSMUSG00000033623ENSMUST00000046975ENSMUST00000112597ENSMUST00000138264ENSMUSG00000060730ENSMUST00000136334
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168993 ENST00000304062 N/A N/A N/A 34.118±27.55 N/A N/A 1.370±0.00 0.863±0.00 2.624±0.00 N/A N/A 0.929±0.37 N/A 0.411±0.00
ENST00000504062 N/A N/A N/A 91.001±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A
ENST00000505203 N/A N/A N/A 25.294±0.00 N/A N/A N/A N/A 0.715±0.00 N/A N/A 1.025±0.00 0.356±0.21 0.400±0.00
ENST00000506404 N/A N/A N/A 1.948±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185619 ENST00000362003 1.962±0.00 2.531±0.00 N/A 3.170±0.00 1.452±0.00 1.893±0.00 1.353±0.00 1.868±0.91 N/A N/A N/A 2.338±0.93 1.774±0.00 2.772±0.00
ENST00000400151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440452 2.332±0.00 2.827±0.00 N/A N/A 1.640±0.00 2.591±0.00 0.650±0.00 N/A N/A 2.451±0.00 N/A 3.412±0.00 1.394±0.06 N/A
ENST00000470161 N/A N/A 3.133±0.00 3.398±0.00 N/A N/A 3.119±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000475288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505655 N/A N/A N/A 2.306±0.00 N/A 3.607±0.00 N/A N/A 3.940±0.00 N/A 1.343±0.47 6.630±0.00 2.803±0.12 8.330±0.00
ENST00000620529 4.179±0.00 4.597±0.00 N/A 4.758±0.00 5.037±0.00 3.122±0.00 1.649±0.24 3.700±0.00 2.079±0.00 5.791±0.00 1.372±0.09 7.507±4.21 4.082±1.23 7.646±1.00
ENSG00000248416 ENST00000502923 0.060±0.00 N/A N/A N/A N/A N/A 0.255±0.00 N/A N/A 0.334±0.00 N/A 0.859±0.00 0.179±0.00 0.311±0.25
ENSG00000272588 ENST00000607877 0.246±0.00 1.412±0.00 1.369±0.00 0.713±0.00 0.557±0.26 0.444±0.06 0.140±0.11 0.634±0.00 0.134±0.00 0.039±0.00 N/A 0.513±0.24 0.119±0.02 0.447±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033615 ENSMUST00000046892 0.046±0.03 0.599±0.27 0.083±0.04 70.194±89.29 0.081±0.03 0.466±0.13 0.165±0.07 0.115±0.00 0.009±0.00 0.053±0.03 0.058±0.05 0.250±0.11 0.376±0.47 0.329±0.13
ENSMUST00000129040 N/A N/A 0.145±0.00 542.376±0.00 N/A N/A N/A 0.296±0.00 0.213±0.00 N/A 0.136±0.00 0.362±0.13 2.895±2.77 2.616±0.00
ENSMUSG00000033623 ENSMUST00000046975 4.799±1.72 3.845±0.86 6.209±0.19 6.370±5.10 3.902±0.94 7.739±1.33 3.661±0.20 4.688±0.35 3.061±0.92 6.637±0.48 4.345±1.08 6.694±1.64 6.290±3.00 1.745±0.77
ENSMUST00000112597 N/A 1.940±0.08 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138264 N/A N/A N/A 10.774±0.00 N/A N/A N/A N/A N/A N/A N/A 19.446±0.00 23.047±2.88 12.351±0.00
ENSMUST00000143973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060730 ENSMUST00000136334 0.386±0.00 0.321±0.00 0.136±0.00 N/A 2.534±2.25 N/A 0.163±0.00 N/A 0.127±0.05 N/A N/A 0.831±0.18 0.191±0.12 N/A

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