C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tripartite motif-containing 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047145 Trim41-001 ENSMUSG00000040365 10090 - 11:48806404-48817353 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaTestisENSMUST00000047145
Transcript ID Muscle Placenta Testis
ENSMUST00000047145 13.437±0.00 39.968±0.54 33.152±11.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315073 TRIM41-002 protein_coding Homo_sapiens 0 2737
ENST00000351937 TRIM41-001 protein_coding Homo_sapiens 0 2058
ENST00000503114 TRIM41-005 nonsense_mediated_decay Homo_sapiens 0 1526
ENST00000508930 TRIM41-003 retained_intron Homo_sapiens 0 1664
ENST00000510072 TRIM41-010 processed_transcript Homo_sapiens 0 785
ENST00000514219 TRIM41-011 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000515223 TRIM41-006 retained_intron Homo_sapiens 0 905
ENST00000515499 TRIM41-009 protein_coding Homo_sapiens 0 736
ENST00000515834 TRIM41-007 retained_intron Homo_sapiens 0 335
ENST00000617715 TRIM41-201 protein_coding Homo_sapiens 0 405

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