C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315073 TRIM41-002 ENSG00000146063 9606 + 5:181223290-181235809 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000315073
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000315073 3.761±0.00 4.192±0.00 0.377±0.00 8.330±7.05 7.242±0.00 1.483±0.90 2.821±2.66 8.348±0.00 3.477±0.00 10.149±0.00 5.450±2.54 4.453±1.43 10.588±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047145 Trim41-001 protein_coding Mus_musculus 0 2737
ENSMUST00000140800 Trim41-002 protein_coding Mus_musculus 0 662
ENSMUST00000138019 Trim41-004 protein_coding Mus_musculus 0 475
ENSMUST00000131888 Trim41-003 protein_coding Mus_musculus 0 379
ENSMUST00000082175 Trim68-201 protein_coding Mus_musculus 0.00002 57

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