C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2310036O22 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047281 2310036O22Rik-201 ENSMUSG00000041203 10090 + 8:85026833-85030285 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047281 56.181±15.53 50.997±7.26 77.429±16.24 83.280±23.20 37.188±11.58 60.701±11.77 32.645±1.92 64.296±10.63 65.226±27.10 50.737±11.32 27.271±3.78 62.699±14.17 82.435±30.14 50.116±9.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZV CIL_0007ZV_0002 VISTA 8:84428902-85032705
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242784 C19orf43-001 protein_coding Homo_sapiens 0 902
ENST00000588213 C19orf43-005 protein_coding Homo_sapiens 0 743
ENST00000589590 C19orf43-006 retained_intron Homo_sapiens 0 477
ENST00000591254 C19orf43-004 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000592273 C19orf43-003 protein_coding Homo_sapiens 0 377

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