C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RCC1 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047362 Rccd1-001 ENSMUSG00000038930 10090 - 7:80316636-80324424 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartKidneyLiverMusclePlacentaENSMUST00000047362
Transcript ID Bladder Heart Kidney Liver Muscle Placenta
ENSMUST00000047362 1.486±0.10 0.647±0.01 0.367±0.17 0.583±0.22 0.823±0.00 0.564±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0002 VISTA 7:80145068-80746500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394258 RCCD1-001 protein_coding Homo_sapiens 0 686
ENST00000555155 RCCD1-006 protein_coding Homo_sapiens 0 669
ENST00000555737 RCCD1-003 retained_intron Homo_sapiens 0 481
ENST00000556333 RCCD1-005 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000556618 RCCD1-004 protein_coding Homo_sapiens 0 686
ENST00000556774 RCCD1-009 processed_transcript Homo_sapiens 3e-19 97
ENST00000557266 RCCD1-002 retained_intron Homo_sapiens 0 638
ENST00000557750 RCCD1-008 retained_intron Homo_sapiens 5e-18 97

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