C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vasohibin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047409 Vash2-201 ENSMUSG00000037568 10090 - 1:190947648-190978998 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047409
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047409 0.468±0.23 0.069±0.01 0.087±0.00 18.376±12.77 0.210±0.03 0.207±0.09 0.124±0.00 0.073±0.01 0.116±0.09 0.080±0.01 0.339±0.00 0.684±0.33 2.638±0.69 7.439±4.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A8 CIL_0009A8_0002 VISTA 1:190353740-190955122
CIL_00092Y CIL_00092Y_0002 VISTA 1:190427303-191030173
CIL_0008JQ CIL_0008JQ_0002 VISTA 1:190939014-191541717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001938 ISO positive regulation of endothelial cell proliferation
GO:0003674 ND molecular_function
GO:0005737 ISO cytoplasm
GO:0045766 IMP positive regulation of angiogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000271776 VASH2-006 processed_transcript Homo_sapiens 0 586
ENST00000366964 VASH2-201 protein_coding Homo_sapiens 0 682
ENST00000366965 VASH2-005 protein_coding Homo_sapiens 0 872
ENST00000366966 VASH2-011 protein_coding Homo_sapiens 0 1314
ENST00000366967 VASH2-002 protein_coding Homo_sapiens 0 1074
ENST00000366968 VASH2-001 protein_coding Homo_sapiens 0 1485
ENST00000366969 VASH2-010 processed_transcript Homo_sapiens 0 442
ENST00000490792 VASH2-009 protein_coding Homo_sapiens 0 309
ENST00000493155 VASH2-008 processed_transcript Homo_sapiens 0 381
ENST00000517399 VASH2-013 protein_coding Homo_sapiens 0 1386

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