C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00092Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1324 VISTA 9606 1:213024769-213627791
GeneTranscriptPositionBiotype
ENSG00000136643 (RPS6KC1)
ribosomal protein S6 kinase, 52kDa, polypeptide 1 		ENST00000366959 (RPS6KC1-002) 213051255-213274773 protein_coding
ENST00000366960 (RPS6KC1-001) 213051255-213274773 protein_coding
ENST00000468069 (RPS6KC1-004) 213129527-213176704 processed_transcript
ENST00000490299 (RPS6KC1-003) 213072938-213274773 processed_transcript
ENST00000491616 (RPS6KC1-005) 213242060-213262816 processed_transcript
ENST00000543354 (RPS6KC1-201) 213051233-213273464 protein_coding
ENST00000543470 (RPS6KC1-202) 213051233-213273464 protein_coding
ENST00000614059 (RPS6KC1-203) 213051233-213273464 protein_coding
ENST00000615329 (RPS6KC1-204) 213051233-213273464 protein_coding
ENSG00000225233 (RP11-554K11.2)
 ENST00000417161 (RP11-554K11.2-001) 213492301-213546447 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00092Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1324 VISTA 10090 1:190427303-191030173
GeneTranscriptPositionBiotype
ENSMUSG00000026634 (Angel2)
angel homolog 2 (Drosophila) 		ENSMUST00000027947 (Angel2-002) 190925112-190946962 protein_coding
ENSMUST00000066632 (Angel2-001) 190928492-190946962 protein_coding
ENSMUST00000110899 (Angel2-004) 190928492-190946962 protein_coding
ENSMUST00000123384 (Angel2-003) 190928492-190946962 nonsense_mediated_decay
ENSMUST00000130298 (Angel2-009) 190928851-190935025 processed_transcript
ENSMUST00000134187 (Angel2-006) 190928853-190938005 retained_intron
ENSMUST00000135364 (Angel2-008) 190928822-190937702 protein_coding
ENSMUST00000137608 (Angel2-005) 190928492-190938435 retained_intron
ENSMUST00000144693 (Angel2-007) 190928846-190946962 retained_intron
ENSMUST00000146048 (Angel2-010) 190937252-190939269 processed_transcript
ENSMUSG00000037568 (Vash2)
vasohibin 2 		ENSMUST00000047409 (Vash2-201) 190947648-190978998 protein_coding
ENSMUST00000166139 (Vash2-202) 190949573-190979296 protein_coding
ENSMUSG00000066595 (Mfsd7b)
major facilitator superfamily domain containing 7B 		ENSMUST00000085635 (Mfsd7b-201) 191005832-191026190 protein_coding
ENSMUSG00000089872 (Rps6kc1)
ribosomal protein S6 kinase polypeptide 1 		ENSMUST00000061611 (Rps6kc1-001) 190772879-190911770 protein_coding
ENSMUST00000159066 (Rps6kc1-007) 190885376-190911769 protein_coding
ENSMUST00000159367 (Rps6kc1-006) 190772879-190911738 nonsense_mediated_decay
ENSMUST00000159624 (Rps6kc1-004) 190700202-190911747 nonsense_mediated_decay
ENSMUST00000159823 (Rps6kc1-003) 190796069-190844584 retained_intron
ENSMUST00000160889 (Rps6kc1-005) 190772879-190834036 nonsense_mediated_decay
ENSMUST00000160891 (Rps6kc1-009) 190808888-190810463 retained_intron
ENSMUST00000162500 (Rps6kc1-002) 190798448-190911734 retained_intron
ENSMUST00000162692 (Rps6kc1-008) 190871930-190899717 processed_transcript
ENSMUSG00000093064 (Gm23153)
predicted gene, 23153 		ENSMUST00000175323 (Gm23153-201) 190482845-190483157 misc_RNA
ENSMUSG00000097845 (A230020J21Rik)
RIKEN cDNA A230020J21 gene 		ENSMUST00000181050 (A230020J21Rik-201) 191025350-191026186 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00092Y_0001ENSG00000136643ENST00000366959ENST00000366960ENST00000468069ENST00000490299ENST00000491616ENST00000543354ENST00000543470ENST00000614059ENST00000615329ENSG00000225233ENST00000417161CIL_00092Y_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00092Y_0001ENSG00000136643ENST00000366959ENST00000366960ENST00000468069ENST00000490299ENST00000491616ENST00000543354ENST00000543470ENST00000614059ENST00000615329ENSG00000225233ENST00000417161CIL_00092Y_0002ENSMUSG00000026634ENSMUST00000027947ENSMUST00000066632ENSMUST00000110899ENSMUST00000123384ENSMUST00000135364ENSMUST00000137608ENSMUST00000144693ENSMUSG00000037568ENSMUST00000047409ENSMUST00000166139ENSMUSG00000066595ENSMUST00000085635ENSMUSG00000089872ENSMUST00000061611ENSMUST00000159066ENSMUST00000159367ENSMUST00000159823ENSMUST00000160889ENSMUST00000162500ENSMUSG00000093064ENSMUST00000175323ENSMUSG00000097845ENSMUST00000181050
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136643 ENST00000366959 N/A N/A N/A N/A N/A N/A N/A 0.613±0.00 N/A N/A 0.235±0.00 N/A N/A N/A
ENST00000366960 0.673±0.00 N/A 0.204±0.00 N/A 0.365±0.00 0.990±0.00 N/A N/A 0.173±0.00 1.014±0.00 0.162±0.00 1.344±0.42 0.534±0.17 1.437±0.07
ENST00000468069 N/A N/A 1.893±0.00 N/A N/A N/A N/A N/A N/A 2.852±0.00 N/A N/A N/A N/A
ENST00000490299 N/A N/A N/A 0.992±0.10 N/A N/A 0.208±0.00 N/A N/A 0.539±0.00 N/A 1.302±0.00 N/A N/A
ENST00000491616 N/A N/A 2.191±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543354 1.589±0.00 2.162±0.00 0.404±0.00 3.262±2.22 2.346±0.26 1.704±0.00 1.118±0.00 2.261±0.00 0.995±0.34 1.444±0.00 0.821±0.00 1.874±0.40 1.359±0.16 4.651±0.00
ENST00000543470 N/A N/A N/A 1.061±0.00 N/A N/A 0.667±0.18 N/A N/A N/A N/A N/A N/A 2.114±0.00
ENST00000614059 N/A N/A N/A 2.169±0.00 N/A N/A N/A 0.821±0.00 2.119±0.00 1.458±0.00 N/A 1.232±0.42 1.568±0.00 2.873±0.00
ENST00000615329 1.352±0.00 0.736±0.00 N/A 2.398±0.00 0.705±0.00 1.547±0.00 0.837±0.00 0.839±0.00 0.598±0.00 N/A 0.801±0.39 1.108±0.33 1.040±0.54 3.072±0.00
ENSG00000225233 ENST00000417161 N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026634 ENSMUST00000027947 N/A N/A N/A 7.088±0.00 N/A N/A N/A N/A 1.522±0.15 N/A 1.736±0.00 6.528±0.35 4.662±1.98 1.652±0.00
ENSMUST00000066632 10.711±4.34 13.197±2.34 11.274±2.42 19.543±3.29 8.285±3.75 16.791±2.68 4.047±0.46 7.650±2.06 4.578±2.20 11.454±3.44 4.263±1.98 17.429±2.70 5.940±2.00 7.044±3.59
ENSMUST00000110899 N/A N/A N/A N/A 6.201±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123384 N/A 3.181±0.00 N/A 3.108±0.62 N/A 4.059±0.00 N/A 1.748±0.00 1.382±0.27 N/A N/A N/A N/A N/A
ENSMUST00000130298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135364 N/A N/A N/A N/A N/A N/A N/A N/A 4.231±0.49 N/A N/A 16.357±0.00 7.825±0.47 3.665±0.00
ENSMUST00000137608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.496±0.00 N/A N/A
ENSMUST00000144693 N/A N/A 6.013±0.00 4.585±0.64 4.198±0.00 N/A 1.435±0.31 2.386±0.41 2.741±0.30 N/A 1.314±0.00 2.811±0.00 2.594±0.06 N/A
ENSMUST00000146048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037568 ENSMUST00000047409 0.468±0.23 0.069±0.01 0.087±0.00 18.376±12.77 0.210±0.03 0.207±0.09 0.124±0.00 0.073±0.01 0.116±0.09 0.080±0.01 0.339±0.00 0.684±0.33 2.638±0.69 7.439±4.53
ENSMUST00000166139 N/A 0.045±0.02 N/A 3.660±2.04 N/A 0.168±0.12 N/A 0.059±0.03 N/A 0.075±0.00 0.134±0.06 1.071±0.13 4.088±2.02 15.796±0.00
ENSMUSG00000066595 ENSMUST00000085635 1.495±1.31 N/A 3.396±0.00 1.500±0.38 1.669±0.43 1.018±0.02 1.223±0.00 2.777±1.16 2.093±1.61 3.256±0.54 1.372±0.81 2.744±0.84 3.000±1.12 1.669±0.00
ENSMUSG00000089872 ENSMUST00000061611 3.498±0.50 1.570±0.20 3.362±0.99 8.742±3.67 1.466±0.60 2.326±0.42 1.567±0.15 1.553±0.56 1.032±0.38 3.076±0.54 2.886±0.78 2.809±1.34 3.970±1.17 0.801±0.27
ENSMUST00000159066 N/A 11.751±2.57 N/A N/A N/A 4.449±0.00 N/A N/A 2.434±0.40 N/A N/A 5.970±0.97 N/A N/A
ENSMUST00000159367 N/A N/A N/A N/A N/A N/A N/A N/A 1.205±0.00 N/A N/A N/A N/A N/A
ENSMUST00000159624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159823 0.665±0.00 N/A N/A 0.938±0.00 0.219±0.00 N/A 0.262±0.00 N/A 0.232±0.03 N/A N/A 0.451±0.06 0.332±0.00 0.254±0.00
ENSMUST00000160889 N/A N/A 1.561±0.67 N/A 0.898±0.00 N/A N/A 0.882±0.23 0.378±0.01 N/A 1.284±0.25 2.539±1.19 1.805±0.00 0.562±0.00
ENSMUST00000160891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.382±0.70 2.123±0.79 0.386±0.00
ENSMUST00000162692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093064 ENSMUST00000175323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00
ENSMUSG00000097845 ENSMUST00000181050 7.164±2.11 14.682±3.44 3.989±0.00 7.921±1.01 17.617±7.42 10.752±1.65 2.112±0.55 8.322±3.25 3.961±1.94 15.087±2.56 N/A 24.775±5.40 9.335±0.82 2.097±0.35

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