C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: piezo-type mechanosensitive ion channel component 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047480 Piezo2-001 ENSMUSG00000041482 10090 - 18:63010213-63387183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047480
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047480 0.674±0.00 0.115±0.08 0.495±0.27 0.067±0.00 0.371±0.22 0.068±0.00 5.397±0.17 0.038±0.02 2.111±1.69 0.326±0.00 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DT CIL_0005DT_0002 CGP 18:62977836-63387183

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005261 IDA cation channel activity
GO:0005515 IPI protein binding
GO:0005886 IC plasma membrane
GO:0006812 IDA:IMP cation transport
GO:0008381 IDA mechanically-gated ion channel activity
GO:0009612 IMP response to mechanical stimulus
GO:0016021 IEA integral component of membrane
GO:0034220 IDA ion transmembrane transport
GO:0042391 IDA regulation of membrane potential
GO:0050974 IMP detection of mechanical stimulus involved in sensory perception
GO:0098655 IDA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000153654 PIEZO2 (1 of 4)-001 protein_coding Danio_rerio 0 756
ENSDART00000113688 PIEZO2 (1 of 4)-201 protein_coding Danio_rerio 0 741
ENSDART00000111325 PIEZO2 (2 of 4)-201 protein_coding Danio_rerio 0 614
ENST00000301015 PIEZO1-001 protein_coding Homo_sapiens 4e-20 106
ENST00000302079 PIEZO2-007 protein_coding Homo_sapiens 0 3109
ENST00000383408 PIEZO2-201 protein_coding Homo_sapiens 0 3081
ENST00000503781 PIEZO2-003 protein_coding Homo_sapiens 0 3109
ENST00000538948 PIEZO2-011 protein_coding Homo_sapiens 0 2182
ENST00000579112 PIEZO2-013 protein_coding Homo_sapiens 0 351
ENST00000579151 PIEZO2-009 retained_intron Homo_sapiens 0 300
ENST00000579949 PIEZO2-005 protein_coding Homo_sapiens 0 451
ENST00000580640 PIEZO2-006 protein_coding Homo_sapiens 0 3109
ENST00000581680 PIEZO2-012 processed_transcript Homo_sapiens 0 424
ENST00000582913 PIEZO2-015 nonsense_mediated_decay Homo_sapiens 0 8667
ENST00000583325 PIEZO2-004 protein_coding Homo_sapiens 0 756

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