C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 78
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047704 Cep78-201 ENSMUSG00000041491 10090 - 19:15955774-15984989 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047704
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047704 1.854±0.18 5.914±3.11 3.992±0.10 8.151±3.39 2.793±1.21 2.732±0.78 0.915±0.11 0.905±0.12 2.535±2.19 1.121±0.24 0.822±0.33 6.813±3.12 3.323±1.07 3.094±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V7 CIL_0007V7_0002 VISTA 19:15500831-16104666
CIL_00091W CIL_00091W_0002 VISTA 19:15535662-16138956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277082 CEP78-009 protein_coding Homo_sapiens 0 1941
ENST00000376597 CEP78-008 protein_coding Homo_sapiens 0 1659
ENST00000376598 CEP78-003 protein_coding Homo_sapiens 0 1670
ENST00000415759 CEP78-004 protein_coding Homo_sapiens 0 1929
ENST00000424347 CEP78-001 protein_coding Homo_sapiens 0 1718
ENST00000487108 CEP78-002 processed_transcript Homo_sapiens 0 292
ENST00000498582 CEP78-011 retained_intron Homo_sapiens 0 309
ENST00000536374 CEP78-006 retained_intron Homo_sapiens 0 841

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