C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007V7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1585 VISTA 9606 9:78137288-78740904
GeneTranscriptPositionBiotype
ENSG00000135069 (PSAT1)
phosphoserine aminotransferase 1 		ENST00000347159 (PSAT1-002) 78297143-78329454 protein_coding
ENST00000376588 (PSAT1-001) 78297143-78330093 protein_coding
ENSG00000148019 (CEP78)
centrosomal protein 78kDa 		ENST00000277082 (CEP78-009) 78236232-78267067 protein_coding
ENST00000376597 (CEP78-008) 78236207-78267067 protein_coding
ENST00000376598 (CEP78-003) 78236351-78271137 protein_coding
ENST00000415759 (CEP78-004) 78236162-78267075 protein_coding
ENST00000424347 (CEP78-001) 78236062-78279690 protein_coding
ENST00000447629 (CEP78-007) 78264050-78271883 retained_intron
ENST00000459817 (CEP78-005) 78254703-78265401 retained_intron
ENST00000476652 (CEP78-010) 78236141-78266787 processed_transcript
ENST00000487108 (CEP78-002) 78253307-78264228 processed_transcript
ENST00000498582 (CEP78-011) 78254474-78264241 retained_intron
ENST00000536374 (CEP78-006) 78236081-78250453 retained_intron
ENSG00000228781 (RP11-336N8.3)
 ENST00000433468 (RP11-336N8.3-001) 78180214-78180693 processed_pseudogene
ENSG00000233457 (RP11-336N8.1)
 ENST00000428243 (RP11-336N8.1-001) 78150532-78151193 processed_pseudogene
ENSG00000233947 (RP11-336N8.2)
 ENST00000418694 (RP11-336N8.2-001) 78178263-78179512 processed_pseudogene
ENSG00000234819 (RP11-336N8.4)
 ENST00000449661 (RP11-336N8.4-001) 78219120-78219357 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0007V7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1585 VISTA 10090 19:15500831-16104666
GeneTranscriptPositionBiotype
ENSMUSG00000024640 (Psat1)
phosphoserine aminotransferase 1 		ENSMUST00000025542 (Psat1-001) 15904678-15925059 protein_coding
ENSMUST00000159264 (Psat1-006) 15916839-15918337 processed_transcript
ENSMUST00000160170 (Psat1-005) 15918403-15921409 retained_intron
ENSMUST00000161707 (Psat1-003) 15905130-15909712 retained_intron
ENSMUST00000162053 (Psat1-002) 15905127-15924622 protein_coding
ENSMUST00000162233 (Psat1-004) 15920500-15924930 retained_intron
ENSMUST00000162416 (Psat1-007) 15915009-15947337 protein_coding
ENSMUSG00000041491 (Cep78)
centrosomal protein 78 		ENSMUST00000047704 (Cep78-201) 15955774-15984989 protein_coding
ENSMUSG00000090147 (Gm3329)
predicted gene 3329 		ENSMUST00000159873 (Gm3329-001) 15943610-15944165 processed_pseudogene
ENSMUSG00000097557 (C130060C02Rik)
RIKEN cDNA C130060C02 gene 		ENSMUST00000181731 (C130060C02Rik-201) 15985090-16010912 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007V7_0001ENSG00000135069ENST00000347159ENST00000376588ENSG00000148019ENST00000277082ENST00000376597ENST00000376598ENST00000415759ENST00000424347ENST00000447629ENST00000459817ENST00000476652ENST00000487108ENST00000498582ENST00000536374ENSG00000228781ENST00000433468ENSG00000233457ENST00000428243ENSG00000233947ENST00000418694ENSG00000234819ENST00000449661CIL_0007V7_0002ENSMUSG00000024640ENSMUST00000025542ENSMUST00000159264ENSMUST00000160170ENSMUST00000161707ENSMUST00000162053ENSMUST00000162233ENSMUST00000162416ENSMUSG00000041491ENSMUST00000047704ENSMUSG00000090147ENSMUST00000159873ENSMUSG00000097557ENSMUST00000181731
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007V7_0001ENSG00000135069ENST00000347159ENST00000376588ENSG00000148019ENST00000277082ENST00000376597ENST00000376598ENST00000415759ENST00000424347ENST00000447629ENST00000536374ENSG00000228781ENST00000433468ENSG00000233457ENST00000428243ENSG00000233947ENST00000418694ENSG00000234819ENST00000449661CIL_0007V7_0002ENSMUSG00000024640ENSMUST00000025542ENSMUST00000161707ENSMUST00000162053ENSMUST00000162416ENSMUSG00000041491ENSMUST00000047704ENSMUSG00000090147ENSMUST00000159873ENSMUSG00000097557ENSMUST00000181731
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135069 ENST00000347159 N/A N/A N/A N/A N/A 0.457±0.14 N/A N/A N/A N/A 0.214±0.00 N/A N/A N/A
ENST00000376588 2.645±0.00 3.321±0.00 4.949±0.00 36.091±16.97 0.943±0.26 0.675±0.00 0.130±0.01 32.091±4.09 12.875±11.75 0.239±0.00 0.058±0.00 15.239±9.48 2.319±0.18 5.212±1.28
ENSG00000148019 ENST00000277082 0.382±0.00 0.551±0.00 0.416±0.00 N/A N/A N/A N/A 1.014±0.00 N/A 0.786±0.00 N/A 1.376±0.00 0.969±0.36 3.429±0.19
ENST00000376597 N/A N/A N/A N/A N/A N/A N/A N/A 0.538±0.00 N/A N/A 1.652±0.00 0.319±0.00 6.577±1.89
ENST00000376598 0.404±0.00 0.520±0.00 N/A 1.223±0.36 0.699±0.00 0.622±0.00 N/A 1.013±0.00 0.782±0.00 0.859±0.00 0.296±0.06 3.776±1.61 1.418±1.04 5.954±0.00
ENST00000415759 N/A N/A N/A N/A 1.007±0.00 0.561±0.00 N/A N/A N/A N/A N/A N/A 0.460±0.10 N/A
ENST00000424347 0.320±0.00 0.309±0.00 N/A 0.445±0.00 0.359±0.00 N/A 0.140±0.00 0.200±0.00 0.391±0.00 N/A 0.069±0.03 0.745±0.00 0.204±0.06 0.737±0.00
ENST00000447629 N/A 0.676±0.00 N/A N/A 1.366±0.00 1.121±0.19 0.389±0.00 1.289±0.00 0.805±0.00 0.838±0.00 0.147±0.00 N/A 0.665±0.19 N/A
ENST00000459817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A N/A
ENSG00000228781 ENST00000433468 N/A 0.059±0.00 N/A 0.148±0.00 N/A 0.027±0.00 N/A 0.205±0.00 N/A 0.084±0.00 0.026±0.00 N/A N/A 0.078±0.05
ENSG00000233457 ENST00000428243 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A 0.039±0.00
ENSG00000233947 ENST00000418694 0.069±0.00 N/A N/A N/A 0.142±0.00 0.014±0.00 0.027±0.00 0.168±0.00 0.065±0.00 N/A N/A 0.033±0.00 N/A 0.158±0.02
ENSG00000234819 ENST00000449661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A 0.066±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024640 ENSMUST00000025542 17.513±6.75 6.896±0.39 3.190±0.83 18.428±10.26 7.460±2.45 1.743±0.55 0.800±0.20 8.010±1.05 50.894±40.63 2.751±0.65 0.423±0.21 5.468±1.65 37.276±34.88 3.220±1.54
ENSMUST00000159264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161707 N/A 2.169±0.00 1.296±0.00 8.213±1.40 3.201±0.95 N/A N/A N/A 13.458±13.74 0.614±0.00 0.305±0.10 2.454±0.00 2.375±0.00 2.294±0.43
ENSMUST00000162053 N/A 1.391±0.16 1.757±1.00 16.303±8.01 2.127±0.00 0.353±0.14 0.339±0.11 2.796±0.61 10.732±11.13 0.620±0.02 0.156±0.03 2.909±3.09 20.486±11.94 3.296±0.00
ENSMUST00000162233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162416 N/A N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000041491 ENSMUST00000047704 1.854±0.18 5.914±3.11 3.992±0.10 8.151±3.39 2.793±1.21 2.732±0.78 0.915±0.11 0.905±0.12 2.535±2.19 1.121±0.24 0.822±0.33 6.813±3.12 3.323±1.07 3.094±0.72
ENSMUSG00000090147 ENSMUST00000159873 N/A N/A 0.137±0.00 0.019±0.00 N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000097557 ENSMUST00000181731 0.089±0.02 0.197±0.08 0.193±0.05 0.302±0.03 0.264±0.13 0.113±0.04 0.072±0.03 0.087±0.07 0.063±0.03 0.165±0.09 0.027±0.01 0.363±0.19 0.131±0.08 0.335±0.15

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