C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BSD domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048162 Bsdc1-001 ENSMUSG00000040859 10090 + 4:129461581-129488498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048162
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048162 10.225±0.66 6.891±2.41 6.458±3.15 6.582±1.32 4.347±1.66 12.538±3.07 6.727±1.78 9.173±1.83 16.264±9.66 9.339±1.41 5.060±2.74 7.087±1.64 6.101±2.06 11.236±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0002 VISTA 4:129413466-130014337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341071 BSDC1-003 protein_coding Homo_sapiens 0 1227
ENST00000373520 BSDC1-012 nonsense_mediated_decay Homo_sapiens 0 1158
ENST00000419121 BSDC1-006 protein_coding Homo_sapiens 0 1181
ENST00000444377 BSDC1-002 nonsense_mediated_decay Homo_sapiens 0 1371
ENST00000446293 BSDC1-008 protein_coding Homo_sapiens 0 1376
ENST00000455895 BSDC1-001 protein_coding Homo_sapiens 0 1731
ENST00000474414 BSDC1-005 retained_intron Homo_sapiens 0 257
ENST00000526031 BSDC1-007 protein_coding Homo_sapiens 0 1186
ENST00000527163 BSDC1-016 protein_coding Homo_sapiens 0 645
ENST00000527513 BSDC1-017 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000530485 BSDC1-014 protein_coding Homo_sapiens 0 569
ENST00000530753 BSDC1-019 retained_intron Homo_sapiens 0 257
ENST00000530876 BSDC1-018 retained_intron Homo_sapiens 0 385
ENST00000531222 BSDC1-015 retained_intron Homo_sapiens 9e-31 137
ENST00000533084 BSDC1-013 retained_intron Homo_sapiens 0 302

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