C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: programmed cell death 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048184 Pdcd7-201 ENSMUSG00000041837 10090 + 9:65346068-65359642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048184
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048184 4.378±0.97 9.271±2.18 7.167±1.45 9.596±4.99 6.336±1.24 6.357±1.04 3.072±0.68 3.582±0.22 3.264±1.45 4.165±1.73 5.766±0.85 12.270±2.38 12.662±6.11 7.606±4.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0002 VISTA 9:65081642-65684657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005689 IEA U12-type spliceosomal complex
GO:0070234 IDA positive regulation of T cell apoptotic process
GO:2001235 IDA positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000204549 PDCD7-001 protein_coding Homo_sapiens 0 1679
ENST00000559051 PDCD7-004 retained_intron Homo_sapiens 1.99965e-42 176

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