C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H2.0-like homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048572 Hlx-001 ENSMUSG00000039377 10090 - 1:184727140-184732619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048572
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048572 5.544±1.80 4.272±0.74 1.956±0.02 0.465±0.15 6.228±3.47 6.812±1.03 2.743±0.63 1.858±0.17 1.802±0.67 15.558±0.33 1.845±0.76 2.655±0.99 4.506±2.67 0.140±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001889 IMP liver development
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007519 IMP skeletal muscle tissue development
GO:0008284 IMP positive regulation of cell proliferation
GO:0030154 IEA cell differentiation
GO:0045627 IGI positive regulation of T-helper 1 cell differentiation
GO:0045629 IGI negative regulation of T-helper 2 cell differentiation
GO:0046622 IMP positive regulation of organ growth
GO:0048484 IMP enteric nervous system development
GO:0048513 IMP organ development
GO:0048557 IMP embryonic digestive tract morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258106 EMX1-001 protein_coding Homo_sapiens 0.00000007 64
ENST00000366903 HLX-001 protein_coding Homo_sapiens 0 1441
ENST00000394111 EMX1-002 protein_coding Homo_sapiens 0.00000005 64
ENST00000427693 HLX-002 protein_coding Homo_sapiens 0 752
ENST00000464675 EMX1-005 retained_intron Homo_sapiens 0.00000003 64
ENST00000491023 EMX1-004 processed_transcript Homo_sapiens 0.00000003 64
ENST00000549319 HLX-003 retained_intron Homo_sapiens 0 684
ENST00000616281 EMX1-006 retained_intron Homo_sapiens 0.000004 58

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