C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cartilage acidic protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048630 Crtac1-201 ENSMUSG00000042401 10090 - 19:42283037-42431783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048630
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048630 2.304±1.63 0.401±0.21 0.117±0.02 9.888±5.09 0.165±0.06 1.002±0.16 0.027±0.01 0.054±0.02 0.029±0.02 0.053±0.03 0.044±0.02 1.780±0.84 0.126±0.09 0.456±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BZ CIL_0001BZ_0004 CGP 19:42247574-42431783
CIL_0001BX CIL_0001BX_0003 CGP 19:42283037-42592343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007413 IMP axonal fasciculation
GO:0021772 IMP olfactory bulb development
GO:0030426 IDA growth cone
GO:0070062 IEA extracellular vesicular exosome
GO:1900121 IDA negative regulation of receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309155 CRTAC1-003 protein_coding Homo_sapiens 0 2398
ENST00000370591 CRTAC1-201 protein_coding Homo_sapiens 0 2604
ENST00000370597 CRTAC1-001 protein_coding Homo_sapiens 0 2385
ENST00000413387 CRTAC1-002 protein_coding Homo_sapiens 0 1602
ENST00000436034 CRTAC1-004 protein_coding Homo_sapiens 0 202
ENST00000468549 CRTAC1-005 processed_transcript Homo_sapiens 0 350

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