C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sec24 related gene family, member C (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048657 Sec24c-201 ENSMUSG00000039367 10090 + 14:20674321-20694850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048657
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048657 32.500±7.73 39.300±10.35 33.104±0.42 26.958±11.68 43.715±6.00 44.714±7.42 17.859±0.69 33.734±4.99 31.059±3.10 37.285±2.31 12.587±4.51 49.096±15.45 37.030±6.86 21.389±6.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H4 CIL_0001H4_0002 CGP 14:20674321-20700197

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0030127 IEA COPII vesicle coat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339365 SEC24C-002 protein_coding Homo_sapiens 0 4903
ENST00000345254 SEC24C-001 protein_coding Homo_sapiens 0 4994
ENST00000465076 SEC24C-003 nonsense_mediated_decay Homo_sapiens 0 4023
ENST00000477008 SEC24C-004 processed_transcript Homo_sapiens 0 320
ENST00000496827 SEC24C-005 processed_transcript Homo_sapiens 0 545

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