C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC24 family member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339365 SEC24C-002 ENSG00000176986 9606 + 10:73744391-73772161 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartLiverMuscleENST00000339365
Transcript ID Bladder Colon Heart Liver Muscle
ENST00000339365 1.106±0.00 1.505±0.00 1.130±0.00 3.371±0.00 1.504±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001H4 CIL_0001H4_0001 CGP 10:73744384-73780251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006888 NAS:IEA ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 NAS:IEA COPII vesicle coat
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048208 TAS COPII vesicle coating
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048657 Sec24c-201 protein_coding Mus_musculus 0 4903

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