C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LysM, putative peptidoglycan-binding, domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049055 Lysmd3-201 ENSMUSG00000035840 10090 + 13:81657806-81671888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000049055
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000049055 2.064±1.08 3.750±0.47 0.775±0.00 2.022±0.90 4.231±0.56 1.278±0.35 1.406±0.74 3.777±1.56 3.824±0.97 4.332±1.87 5.006±3.96 1.087±0.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315948 LYSMD3-002 protein_coding Homo_sapiens 0 913
ENST00000453259 LYSMD3-004 nonsense_mediated_decay Homo_sapiens 2e-17 94
ENST00000509384 LYSMD3-001 protein_coding Homo_sapiens 0 590

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