C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LysM, putative peptidoglycan-binding, domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315948 LYSMD3-002 ENSG00000176018 9606 - 5:90515626-90529581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315948
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315948 4.111±0.00 3.637±0.00 2.249±0.00 3.000±0.00 2.630±0.00 4.002±0.77 3.709±0.00 4.728±3.10 3.000±0.00 3.964±0.00 1.338±0.91 3.634±1.47 2.789±0.12 3.586±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037K CIL_00037K_0002 CGP 5:90471748-90529584
CIL_0005KB CIL_0005KB_0002 CGP 5:90515611-91164221

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049055 Lysmd3-201 protein_coding Mus_musculus 0 913

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