C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2410131K14 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049138 2410131K14Rik-001 ENSMUSG00000032840 10090 + 5:118245227-118266093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049138
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049138 7.683±1.28 4.950±0.21 3.230±1.08 7.140±1.98 5.780±0.14 3.863±0.22 5.241±0.17 5.199±0.52 1.935±0.71 4.039±0.21 2.430±0.27 8.155±2.33 3.352±1.01 1.531±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YS CIL_0004YS_0002 CGP 5:118190736-118266093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261318 C12orf49-001 protein_coding Homo_sapiens 0 664
ENST00000440178 RP5-875H3.2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000547630 C12orf49-002 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000548356 C12orf49-003 protein_coding Homo_sapiens 0 243

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