C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004YS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053019-ENSDARG00000078315 CGP 7955 5:13005308-13048594
GeneTranscriptPositionBiotype
ENSDARG00000053019 (rnft2)
ring finger protein, transmembrane 2
ENSDART00000074979 (rnft2-201) 13005308-13032130 protein_coding
ENSDARG00000078315 (C5H12orf49)
chromosome 12 open reading frame 49
ENSDART00000114873 (C5H12orf49-201) 13032191-13048594 protein_coding
CIL_0004YS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032850-ENSMUSG00000032840 CGP 10090 5:118190736-118266093
GeneTranscriptPositionBiotype
ENSMUSG00000032840 (2410131K14Rik)
RIKEN cDNA 2410131K14 gene
ENSMUST00000049138 (2410131K14Rik-001) 118245227-118266093 protein_coding
ENSMUSG00000032850 (Rnft2)
ring finger protein, transmembrane 2
ENSMUST00000117177 (Rnft2-001) 118190736-118244861 protein_coding
ENSMUST00000121369 (Rnft2-002) 118190742-118245116 protein_coding
ENSMUST00000132831 (Rnft2-007) 118194054-118201232 protein_coding
ENSMUST00000133372 (Rnft2-003) 118237505-118244992 protein_coding
ENSMUST00000134281 (Rnft2-006) 118193572-118229145 retained_intron
ENSMUST00000144213 (Rnft2-005) 118236927-118242921 retained_intron
ENSMUST00000154786 (Rnft2-004) 118234156-118244994 protein_coding
ENSMUSG00000089248 (Gm24050)
predicted gene, 24050
ENSMUST00000158623 (Gm24050-201) 118211053-118211342 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YS_0001ENSDARG00000053019ENSDART00000074979ENSDARG00000078315ENSDART00000114873CIL_0004YS_0002ENSMUSG00000032840ENSMUST00000049138ENSMUSG00000032850ENSMUST00000117177ENSMUST00000121369ENSMUST00000132831ENSMUST00000133372ENSMUST00000134281ENSMUST00000144213ENSMUST00000154786ENSMUSG00000089248ENSMUST00000158623
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YS_0001ENSDARG00000053019ENSDART00000074979ENSDARG00000078315ENSDART00000114873CIL_0004YS_0002ENSMUSG00000032840ENSMUST00000049138ENSMUSG00000032850ENSMUST00000117177ENSMUST00000121369ENSMUST00000132831ENSMUST00000133372ENSMUST00000134281ENSMUST00000144213ENSMUST00000154786ENSMUSG00000089248ENSMUST00000158623
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053019 ENSDART00000074979 N/A N/A N/A 9.606±2.98 N/A N/A 1.597±0.44 2.765±1.88 0.024±0.00 N/A 0.845±0.00 N/A N/A N/A
ENSDARG00000078315 ENSDART00000114873 N/A N/A N/A 10.510±2.21 N/A N/A 2.266±1.87 2.454±2.08 0.513±0.00 N/A 1.314±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032840 ENSMUST00000049138 7.683±1.28 4.950±0.21 3.230±1.08 7.140±1.98 5.780±0.14 3.863±0.22 5.241±0.17 5.199±0.52 1.935±0.71 4.039±0.21 2.430±0.27 8.155±2.33 3.352±1.01 1.531±0.44
ENSMUSG00000032850 ENSMUST00000117177 0.457±0.00 0.858±0.14 N/A N/A 0.446±0.23 N/A N/A 0.272±0.11 0.041±0.02 0.138±0.00 0.440±0.00 0.783±0.35 N/A 0.526±0.00
ENSMUST00000121369 1.027±0.44 1.093±0.41 0.624±0.22 13.904±0.91 0.399±0.10 0.294±0.11 0.294±0.10 0.252±0.13 0.183±0.09 0.229±0.11 0.356±0.16 1.416±0.52 0.736±0.37 0.871±0.42
ENSMUST00000132831 N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.02 N/A N/A N/A N/A N/A
ENSMUST00000133372 N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A N/A N/A N/A N/A
ENSMUST00000134281 N/A N/A N/A N/A N/A 0.796±0.00 N/A N/A 0.128±0.12 N/A 0.420±0.00 N/A 1.052±0.52 0.331±0.00
ENSMUST00000144213 N/A N/A N/A N/A N/A 0.641±0.00 N/A N/A 0.097±0.02 N/A N/A N/A N/A N/A
ENSMUST00000154786 N/A 1.574±0.23 N/A 30.396±0.00 N/A N/A N/A 0.678±0.09 N/A 0.615±0.00 0.495±0.00 1.855±0.12 2.525±0.00 N/A
ENSMUSG00000089248 ENSMUST00000158623 0.307±0.03 N/A 0.130±0.00 0.321±0.00 N/A N/A 0.242±0.00 N/A 0.140±0.02 N/A N/A 0.630±0.20 0.259±0.10 N/A

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