C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat protein 1, neuronal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049285 Lrrn1-201 ENSMUSG00000034648 10090 + 6:107529726-107570228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049285 1.722±1.51 86.325±12.36 0.265±0.00 8.990±1.44 0.838±0.44 0.209±0.13 0.136±0.01 3.235±0.63 0.097±0.10 0.633±0.48 2.142±0.47 50.778±21.36 0.071±0.07 0.135±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050L CIL_00050L_0002 CGP 6:107529726-108077122

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319331 LRRN1-001 protein_coding Homo_sapiens 0 3443
ENST00000469888 SUMF1-009 processed_transcript Homo_sapiens 9e-21 104
ENST00000472075 LRRN1-002 retained_intron Homo_sapiens 1e-20 104

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