C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00050L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175928-ENSG00000170364 CGP 9606 3:3799437-4317567
GeneTranscriptPositionBiotype
ENSG00000170364 (SETMAR)
SET domain and mariner transposase fusion gene 		ENST00000358065 (SETMAR-001) 4303304-4317567 protein_coding
ENST00000358950 (SETMAR-003) 4303608-4316536 protein_coding
ENST00000413809 (SETMAR-007) 4303332-4317265 nonsense_mediated_decay
ENST00000425046 (SETMAR-006) 4303337-4317265 nonsense_mediated_decay
ENST00000425863 (SETMAR-008) 4303371-4317265 protein_coding
ENST00000430981 (SETMAR-002) 4303361-4314402 protein_coding
ENST00000462115 (SETMAR-005) 4303627-4313101 processed_transcript
ENST00000490691 (SETMAR-010) 4303613-4316412 processed_transcript
ENSG00000175928 (LRRN1)
leucine rich repeat neuronal 1 		ENST00000319331 (LRRN1-001) 3799437-3847703 protein_coding
ENST00000472075 (LRRN1-002) 3799696-3804192 retained_intron
ENST00000496115 (LRRN1-003) 3800871-3844579 processed_transcript
ENSG00000229241 (PNPT1P1)
polyribonucleotide nucleotidyltransferase 1 pseudogene 1 		ENST00000450418 (PNPT1P1-001) 3981981-3984295 processed_pseudogene
CIL_00050L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034648-ENSMUSG00000034639 CGP 10090 6:107529726-108077122
GeneTranscriptPositionBiotype
ENSMUSG00000034639 (Setmar)
SET domain without mariner transposase fusion 		ENSMUST00000049246 (Setmar-001) 108065045-108077122 protein_coding
ENSMUST00000138140 (Setmar-002) 108065062-108076061 processed_transcript
ENSMUSG00000034648 (Lrrn1)
leucine rich repeat protein 1, neuronal 		ENSMUST00000049285 (Lrrn1-201) 107529726-107570228 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050L_0001ENSG00000170364ENST00000358065ENST00000358950ENST00000413809ENST00000425046ENST00000425863ENST00000430981ENST00000462115ENST00000490691ENSG00000175928ENST00000319331ENST00000472075ENST00000496115ENSG00000229241ENST00000450418CIL_00050L_0002ENSMUSG00000034639ENSMUST00000049246ENSMUST00000138140ENSMUSG00000034648ENSMUST00000049285
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050L_0001ENSG00000170364ENST00000358065ENST00000358950ENST00000413809ENST00000425046ENST00000425863ENST00000430981ENSG00000175928ENST00000319331ENSG00000229241ENST00000450418CIL_00050L_0002ENSMUSG00000034639ENSMUST00000049246ENSMUST00000138140ENSMUSG00000034648ENSMUST00000049285
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170364 ENST00000358065 1.064±0.00 N/A 0.587±0.00 0.179±0.00 0.836±0.00 0.632±0.25 0.229±0.13 1.398±0.47 0.270±0.00 0.572±0.10 0.753±0.00 1.388±0.67 0.563±0.23 0.787±0.19
ENST00000358950 N/A N/A N/A N/A N/A 0.918±0.00 0.287±0.00 N/A N/A N/A N/A 1.868±0.00 N/A N/A
ENST00000413809 N/A 1.175±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.617±0.00 N/A N/A 0.723±0.00
ENST00000425046 1.538±0.00 7.683±0.00 0.680±0.00 3.230±1.51 6.276±3.51 3.190±1.78 1.336±1.17 5.570±0.00 2.163±0.21 2.326±1.24 2.406±0.42 7.044±3.42 3.645±0.19 3.614±1.24
ENST00000425863 N/A N/A N/A N/A N/A N/A 0.496±0.15 N/A 0.567±0.00 N/A N/A 1.089±0.79 N/A N/A
ENST00000430981 N/A 0.831±0.00 N/A 0.416±0.00 N/A 0.991±0.00 0.183±0.00 N/A 1.473±0.00 1.398±0.00 N/A 1.023±0.62 N/A 1.137±0.00
ENST00000462115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175928 ENST00000319331 N/A N/A 0.544±0.00 2.399±0.63 N/A 0.366±0.00 N/A N/A 0.407±0.00 0.709±0.13 1.035±0.67 1.460±0.85 N/A 2.813±0.35
ENST00000472075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229241 ENST00000450418 0.004±0.00 0.047±0.00 0.613±0.00 0.026±0.00 0.312±0.27 0.637±0.00 0.060±0.02 0.155±0.09 0.154±0.00 0.606±0.00 0.009±0.01 0.124±0.15 0.036±0.00 0.018±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034639 ENSMUST00000049246 2.110±0.37 0.990±0.18 3.345±0.85 2.406±0.39 1.350±0.34 1.143±0.15 1.003±0.14 2.141±0.26 1.123±0.40 1.740±0.25 2.010±0.30 2.328±0.75 1.719±0.51 0.409±0.18
ENSMUST00000138140 N/A N/A N/A N/A 0.394±0.00 N/A N/A N/A 0.334±0.01 N/A N/A N/A N/A N/A
ENSMUSG00000034648 ENSMUST00000049285 1.722±1.51 86.325±12.36 0.265±0.00 8.990±1.44 0.838±0.44 0.209±0.13 0.136±0.01 3.235±0.63 0.097±0.10 0.633±0.48 2.142±0.47 50.778±21.36 0.071±0.07 0.135±0.05

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