C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inositol 1,4,5-triphosphate receptor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049308 Itpr3-001 ENSMUSG00000042644 10090 + 17:27057304-27122223 protein_coding

Mus musculus EnsemblGRCm38

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049308
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049308 2.566±0.61 2.127±0.93 7.540±2.73 0.852±0.71 10.380±4.41 22.493±1.65 1.178±0.42 1.770±0.53 0.434±0.28 8.503±2.40 0.624±0.10 4.405±1.73 4.050±1.20 4.403±1.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000915 CIL_000915_0002 VISTA 17:26527896-27128643
CIL_0008HF CIL_0008HF_0002 VISTA 17:26563571-27166666
CIL_000255 CIL_000255_0002 CGP 17:27019810-27122223
CIL_00024Y CIL_00024Y_0002 CGP 17:27057304-27133916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005218 IDA intracellular ligand-gated calcium channel activity
GO:0005220 IDA inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IEA plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0006816 IDA calcium ion transport
GO:0007613 IMP memory
GO:0035091 IDA phosphatidylinositol binding
GO:0043235 ISO receptor complex
GO:0048016 IEA inositol phosphate-mediated signaling
GO:0050913 IMP sensory perception of bitter taste
GO:0050916 IMP sensory perception of sweet taste
GO:0050917 IMP sensory perception of umami taste
GO:0051592 IEA response to calcium ion
GO:0060291 IMP long-term synaptic potentiation
GO:0060402 IDA calcium ion transport into cytosol
GO:0070588 IEA calcium ion transmembrane transport
GO:0070679 IEA inositol 1,4,5 trisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000142836 itpr3-001 protein_coding Danio_rerio 0 497
ENSDART00000154505 itpr2-201 protein_coding Danio_rerio 0 265
ENSDART00000061134 itpr2-001 protein_coding Danio_rerio 0 265
ENST00000374316 ITPR3-001 protein_coding Homo_sapiens 0 10250
ENST00000605930 ITPR3-201 protein_coding Homo_sapiens 0 10190
ENST00000606961 UQCC2-003 retained_intron Homo_sapiens 4e-18 99

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