C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000255_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000030110-ENSG00000096433 CGP 9606 6:33572547-33696574
GeneTranscriptPositionBiotype
ENSG00000030110 (BAK1)
BCL2-antagonist/killer 1 		ENST00000360661 (BAK1-201) 33572547-33580293 protein_coding
ENST00000374467 (BAK1-002) 33572552-33580242 protein_coding
ENST00000442998 (BAK1-202) 33572547-33580293 protein_coding
ENSG00000096433 (ITPR3)
inositol 1,4,5-trisphosphate receptor, type 3 		ENST00000374316 (ITPR3-001) 33620365-33696574 protein_coding
ENST00000605930 (ITPR3-201) 33621379-33696569 protein_coding
ENSG00000137288 (UQCC2)
ubiquinol-cytochrome c reductase complex assembly factor 2 		ENST00000374214 (UQCC2-002) 33697568-33711727 protein_coding
ENST00000374231 (UQCC2-004) 33695349-33711684 protein_coding
ENST00000606961 (UQCC2-003) 33694293-33698657 retained_intron
ENST00000607484 (UQCC2-001) 33696761-33711727 protein_coding
ENSG00000197251 (LINC00336)
long intergenic non-protein coding RNA 336 		ENST00000477984 (LINC00336-001) 33586106-33593338 lincRNA
CIL_000255_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057789-ENSMUSG00000042644 CGP 10090 17:27019810-27122223
GeneTranscriptPositionBiotype
ENSMUSG00000042644 (Itpr3)
inositol 1,4,5-triphosphate receptor 3 		ENSMUST00000049308 (Itpr3-001) 27057304-27122223 protein_coding
ENSMUSG00000048731 (Ggnbp1)
gametogenetin binding protein 1 		ENSMUST00000053683 (Ggnbp1-001) 27029259-27036378 protein_coding
ENSMUST00000122106 (Ggnbp1-003) 27018024-27036378 protein_coding
ENSMUST00000133257 (Ggnbp1-002) 26973217-27036378 protein_coding
ENSMUST00000142141 (Ggnbp1-006) 27018040-27022517 processed_transcript
ENSMUST00000151920 (Ggnbp1-007) 27018013-27026693 retained_intron
ENSMUST00000154731 (Ggnbp1-005) 27030404-27034809 retained_intron
ENSMUSG00000057789 (Bak1)
BCL2-antagonist/killer 1 		ENSMUST00000025034 (Bak1-002) 27019812-27028578 nonsense_mediated_decay
ENSMUST00000078691 (Bak1-001) 27019810-27029009 protein_coding
ENSMUST00000133448 (Bak1-003) 27022576-27028587 processed_transcript
ENSMUST00000143158 (Bak1-004) 27020666-27022786 protein_coding
ENSMUSG00000086898 (Itpr3os)
inositol 1,4,5-triphosphate receptor 3, opposite strand 		ENSMUST00000143605 (Itpr3os-001) 27099658-27101440 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000255_0001ENSG00000030110ENST00000360661ENST00000374467ENST00000442998ENSG00000096433ENST00000374316ENST00000605930ENSG00000137288ENST00000374214ENST00000374231ENST00000606961ENST00000607484ENSG00000197251ENST00000477984CIL_000255_0002ENSMUSG00000042644ENSMUST00000049308ENSMUSG00000048731ENSMUST00000053683ENSMUST00000122106ENSMUST00000133257ENSMUST00000142141ENSMUST00000151920ENSMUST00000154731ENSMUSG00000057789ENSMUST00000025034ENSMUST00000078691ENSMUST00000133448ENSMUST00000143158ENSMUSG00000086898ENSMUST00000143605
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000255_0001ENSG00000030110ENST00000360661ENST00000374467ENST00000442998ENSG00000096433ENST00000374316ENST00000605930ENSG00000137288ENST00000374214ENST00000374231ENST00000606961ENST00000607484ENSG00000197251ENST00000477984CIL_000255_0002ENSMUSG00000042644ENSMUST00000049308ENSMUSG00000048731ENSMUST00000053683ENSMUST00000133257ENSMUST00000142141ENSMUST00000151920ENSMUSG00000057789ENSMUST00000025034ENSMUST00000078691ENSMUSG00000086898ENSMUST00000143605
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000030110 ENST00000360661 2.363±0.00 N/A 0.507±0.00 N/A 2.163±0.00 0.958±0.16 0.898±0.00 0.600±0.00 N/A N/A N/A 2.949±1.80 0.769±0.00 3.107±0.00
ENST00000374467 2.413±0.00 12.534±0.00 N/A 1.098±0.65 2.573±1.93 4.707±2.21 4.544±0.00 14.954±0.00 1.987±1.53 6.038±4.96 2.308±0.82 8.293±4.05 11.785±4.74 3.047±0.50
ENST00000442998 N/A N/A N/A 0.559±0.00 N/A N/A 0.313±0.00 N/A N/A N/A N/A N/A 0.736±0.00 N/A
ENSG00000096433 ENST00000374316 N/A N/A N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A N/A N/A N/A
ENST00000605930 6.155±0.00 5.383±0.00 0.232±0.00 0.510±0.30 1.889±0.29 4.504±1.41 1.034±0.41 3.362±2.91 0.983±0.00 6.463±3.19 0.777±0.00 17.398±16.85 1.894±0.08 5.899±2.42
ENSG00000137288 ENST00000374214 N/A 35.787±0.00 N/A 17.328±0.00 16.044±0.00 14.197±0.00 46.210±0.00 4.012±0.00 27.960±0.00 N/A 31.171±17.90 N/A 25.074±0.00 52.286±0.00
ENST00000374231 N/A 24.824±0.00 2.678±0.00 9.282±2.44 12.358±0.00 11.595±0.00 30.469±20.96 15.363±12.43 19.372±0.00 N/A 21.929±12.59 43.294±0.00 32.768±12.11 43.091±5.76
ENST00000606961 N/A N/A 0.529±0.00 0.849±0.00 N/A N/A 1.544±0.00 0.243±0.00 0.649±0.12 N/A N/A 3.328±0.00 1.868±0.10 3.972±0.54
ENST00000607484 N/A N/A N/A 2.685±0.00 N/A N/A 1.567±0.00 N/A N/A N/A N/A 11.177±0.00 N/A N/A
ENSG00000197251 ENST00000477984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.294±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042644 ENSMUST00000049308 2.566±0.61 2.127±0.93 7.540±2.73 0.852±0.71 10.380±4.41 22.493±1.65 1.178±0.42 1.770±0.53 0.434±0.28 8.503±2.40 0.624±0.10 4.405±1.73 4.050±1.20 4.403±1.06
ENSMUSG00000048731 ENSMUST00000053683 N/A N/A 9.380±0.00 N/A N/A N/A N/A 14.842±0.00 N/A N/A 5.146±0.00 N/A N/A 286.659±37.18
ENSMUST00000122106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133257 N/A 7.207±1.42 N/A N/A N/A N/A 3.203±0.00 N/A N/A N/A N/A 3.366±0.43 N/A N/A
ENSMUST00000142141 N/A N/A N/A N/A N/A N/A 54.834±9.83 46.846±4.04 N/A N/A 44.250±3.40 N/A N/A N/A
ENSMUST00000151920 N/A N/A N/A N/A N/A N/A 7.460±0.00 N/A N/A N/A 3.978±0.00 N/A N/A N/A
ENSMUST00000154731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057789 ENSMUST00000025034 8.620±2.15 5.806±0.00 5.309±0.00 7.180±3.18 7.427±0.67 18.938±3.85 N/A 6.461±2.60 4.491±0.71 N/A N/A 7.714±0.53 8.558±4.75 N/A
ENSMUST00000078691 20.099±5.19 18.599±3.34 14.638±1.58 3.291±0.46 16.977±6.33 46.588±12.78 10.055±1.17 11.375±1.94 8.144±1.59 17.534±0.54 9.376±1.16 20.706±7.09 5.881±1.38 N/A
ENSMUST00000133448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086898 ENSMUST00000143605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 71.207±38.48

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