C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: F-box and WD-40 domain protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049474 Fbxw8-201 ENSMUSG00000032867 10090 - 5:118064981-118155458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049474
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049474 15.383±3.23 12.981±7.37 1.500±0.00 4.117±2.84 18.433±4.94 13.262±3.20 8.845±2.57 13.037±6.27 6.007±4.39 15.909±6.68 4.832±1.27 19.705±9.49 35.672±16.85 6.021±3.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YT CIL_0004YT_0002 CGP 5:118027743-118155458

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005794 ISS Golgi apparatus
GO:0006511 IC ubiquitin-dependent protein catabolic process
GO:0007030 ISS Golgi organization
GO:0008283 ISS cell proliferation
GO:0016567 ISS protein ubiquitination
GO:0019005 IPI SCF ubiquitin ligase complex
GO:0031467 IDA Cul7-RING ubiquitin ligase complex
GO:0048471 ISS perinuclear region of cytoplasm
GO:0050775 ISS positive regulation of dendrite morphogenesis
GO:0060712 IMP spongiotrophoblast layer development
GO:0060716 IMP labyrinthine layer blood vessel development
GO:1990393 ISS 3M complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309909 FBXW8-002 protein_coding Homo_sapiens 0 1480
ENST00000455858 FBXW8-001 protein_coding Homo_sapiens 0 1349

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