C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004YT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000028346-ENSDARG00000079089 CGP 7955 5:12929285-12994300
GeneTranscriptPositionBiotype
ENSDARG00000028346 (tesca)
tescalcin a 		ENSDART00000030444 (tesca-001) 12929285-12952804 protein_coding
ENSDARG00000079089 (fbxw8)
F-box and WD repeat domain containing 8 		ENSDART00000114378 (fbxw8-201) 12952809-12994300 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004YT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029359-ENSMUSG00000032867 CGP 10090 5:118027743-118155458
GeneTranscriptPositionBiotype
ENSMUSG00000029359 (Tesc)
tescalcin 		ENSMUST00000031304 (Tesc-001) 118027743-118061878 protein_coding
ENSMUST00000124648 (Tesc-002) 118027765-118061845 nonsense_mediated_decay
ENSMUST00000135540 (Tesc-006) 118027870-118061870 retained_intron
ENSMUST00000145526 (Tesc-005) 118041317-118046380 processed_transcript
ENSMUST00000148777 (Tesc-004) 118041316-118053664 processed_transcript
ENSMUST00000151792 (Tesc-003) 118036031-118061773 processed_transcript
ENSMUSG00000029360 (Gm9754)
predicted gene 9754 		ENSMUST00000031305 (Gm9754-201) 118065360-118069710 protein_coding
ENSMUSG00000032867 (Fbxw8)
F-box and WD-40 domain protein 8 		ENSMUST00000049474 (Fbxw8-201) 118064981-118155458 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YT_0001ENSDARG00000028346ENSDART00000030444ENSDARG00000079089ENSDART00000114378CIL_0004YT_0002ENSMUSG00000029359ENSMUST00000031304ENSMUST00000124648ENSMUST00000135540ENSMUST00000145526ENSMUST00000148777ENSMUST00000151792ENSMUSG00000029360ENSMUST00000031305ENSMUSG00000032867ENSMUST00000049474
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YT_0001ENSDARG00000028346ENSDART00000030444ENSDARG00000079089ENSDART00000114378CIL_0004YT_0002ENSMUSG00000029359ENSMUST00000031304ENSMUST00000124648ENSMUST00000135540ENSMUST00000151792ENSMUSG00000029360ENSMUST00000031305ENSMUSG00000032867ENSMUST00000049474
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000028346 ENSDART00000030444 N/A N/A N/A 0.452±0.19 N/A N/A 3.096±0.67 1.114±0.22 0.028±0.00 N/A 1.940±0.00 N/A N/A N/A
ENSDARG00000079089 ENSDART00000114378 N/A N/A N/A 2.533±2.03 N/A N/A 3.414±2.39 4.010±1.38 0.215±0.00 N/A 3.159±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029359 ENSMUST00000031304 0.944±0.42 N/A 0.723±0.15 6.412±7.74 2.298±0.99 0.639±0.00 38.383±5.96 8.823±2.85 0.535±0.28 1.508±0.00 0.252±0.06 2.315±1.25 0.282±0.26 1.126±0.23
ENSMUST00000124648 0.467±0.20 396.383±143.97 N/A N/A 6.304±2.92 6.688±2.41 21.380±4.04 9.137±4.92 0.151±0.05 2.495±0.62 0.070±0.00 5.107±3.04 0.604±0.00 0.344±0.00
ENSMUST00000135540 0.196±0.00 N/A N/A 5.921±0.00 0.464±0.00 N/A N/A N/A 0.094±0.04 N/A 0.311±0.19 0.697±0.00 N/A 0.318±0.14
ENSMUST00000145526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 1.044±0.44 0.108±0.03 N/A
ENSMUSG00000029360 ENSMUST00000031305 8.619±1.07 10.447±0.56 4.232±1.71 3.836±0.79 8.573±0.33 5.322±0.36 3.769±0.14 6.695±0.51 3.470±1.15 8.792±0.70 1.121±0.02 9.891±2.98 11.591±1.57 1.843±0.15
ENSMUSG00000032867 ENSMUST00000049474 15.383±3.23 12.981±7.37 1.500±0.00 4.117±2.84 18.433±4.94 13.262±3.20 8.845±2.57 13.037±6.27 6.007±4.39 15.909±6.68 4.832±1.27 19.705±9.49 35.672±16.85 6.021±3.00

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