C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal modification protein rimK-like family member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049994 Rimkla-001 ENSMUSG00000048899 10090 - 4:119465283-119492628 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000049994
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000049994 0.182±0.06 0.196±0.00 0.106±0.01 5.515±2.94 0.136±0.08 0.353±0.21 0.096±0.05 0.214±0.04 0.017±0.00 0.179±0.00 0.024±0.01 1.385±0.55 0.085±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0006464 IEA cellular protein modification process
GO:0046872 IEA metal ion binding
GO:0072590 IDA N-acetyl-L-aspartate-L-glutamate ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000410070 RIMKLA-002 protein_coding Homo_sapiens 0 586
ENST00000431473 RIMKLA-001 protein_coding Homo_sapiens 0 1500

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