C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Myb/SANT-like DNA-binding domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050535 Msantd1-201 ENSMUSG00000051246 10090 + 5:34915915-34923839 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050535
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050535 0.167±0.08 0.718±0.29 0.686±0.22 0.306±0.22 0.760±0.46 0.131±0.03 0.235±0.08 0.187±0.06 0.357±0.18 0.081±0.04 0.587±0.50 0.178±0.10 0.533±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000747 CIL_000747_0002 CGP 5:34761740-34923839
CIL_0003Z3 CIL_0003Z3_0002 CGP 5:34915915-35039644

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000438480 MSANTD1-003 protein_coding Homo_sapiens 0 1393
ENST00000505599 MSANTD1-002 nonsense_mediated_decay Homo_sapiens 0 1192
ENST00000507492 MSANTD1-001 protein_coding Homo_sapiens 0 1051
ENST00000510580 MSANTD1-004 protein_coding Homo_sapiens 0 1042

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