C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hyaluronan synthase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050544 Has2-001 ENSMUSG00000022367 10090 - 15:56665627-56694539 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050544
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050544 1.165±0.62 0.039±0.00 0.524±0.02 0.678±0.52 1.190±0.21 0.378±0.08 0.199±0.03 0.022±0.01 0.114±0.09 0.148±0.04 0.093±0.02 0.160±0.11 0.284±0.28 0.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EA CIL_0002EA_0003 CGP 15:55638843-56694539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001570 IMP vasculogenesis
GO:0001822 IEA kidney development
GO:0005887 IEA integral component of plasma membrane
GO:0008284 IEA positive regulation of cell proliferation
GO:0030212 IMP hyaluronan metabolic process
GO:0030213 ISS hyaluronan biosynthetic process
GO:0030335 IEA positive regulation of cell migration
GO:0035810 ISS positive regulation of urine volume
GO:0036120 IEA cellular response to platelet-derived growth factor stimulus
GO:0036302 IMP atrioventricular canal development
GO:0045226 IDA extracellular polysaccharide biosynthetic process
GO:0050501 ISS hyaluronan synthase activity
GO:0060349 IMP bone morphogenesis
GO:0070295 ISS renal water absorption
GO:0071347 IEA cellular response to interleukin-1
GO:0071356 IEA cellular response to tumor necrosis factor
GO:0071498 IEA cellular response to fluid shear stress
GO:0085029 IDA extracellular matrix assembly
GO:0090500 IMP endocardial cushion to mesenchymal transition
GO:1900625 IEA positive regulation of monocyte aggregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303924 HAS2-001 protein_coding Homo_sapiens 0 2553

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