C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipocalin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050785 Lcn2-001 ENSMUSG00000026822 10090 - 2:32384633-32387797 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050785
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050785 11.555±7.15 0.667±0.39 1.317±0.15 0.204±0.05 98.340±24.80 3.871±0.63 2.992±1.51 3.886±0.32 87.275±134.40 123.557±28.30 0.432±0.18 111.420±51.47 1.956±1.58 105.582±44.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002020 IEA protease binding
GO:0005215 IEA transporter activity
GO:0005506 IDA iron ion binding
GO:0005515 IPI protein binding
GO:0005576 IDA extracellular region
GO:0005615 IEA extracellular space
GO:0005829 IEA cytosol
GO:0006811 IEA ion transport
GO:0006979 IEA response to oxidative stress
GO:0009615 IDA response to virus
GO:0009617 IEA response to bacterium
GO:0009635 IEA response to herbicide
GO:0009636 IEA response to toxic substance
GO:0010628 IEA positive regulation of gene expression
GO:0015891 IDA siderophore transport
GO:0031346 IEA positive regulation of cell projection organization
GO:0031667 IEA response to nutrient levels
GO:0031669 IEA cellular response to nutrient levels
GO:0036094 IEA small molecule binding
GO:0042493 IEA response to drug
GO:0042803 IEA protein homodimerization activity
GO:0045087 IMP innate immune response
GO:0055072 IEA iron ion homeostasis
GO:0070062 IEA extracellular vesicular exosome
GO:0070207 IEA protein homotrimerization
GO:0070301 IEA cellular response to hydrogen peroxide
GO:0071222 IEA cellular response to lipopolysaccharide
GO:0071347 IEA cellular response to interleukin-1
GO:0071356 IEA cellular response to tumor necrosis factor
GO:0097192 IDA extrinsic apoptotic signaling pathway in absence of ligand

Homologs

No Homologs available.

Loading