C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050916 Snx33-201 ENSMUSG00000032733 10090 - 9:56917200-56928371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050916
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050916 7.780±1.75 7.434±2.56 9.901±0.56 1.121±0.03 8.872±3.13 5.384±1.95 2.567±0.38 5.188±1.02 2.927±1.94 11.713±1.59 0.888±0.12 11.244±2.17 4.112±3.54 2.564±1.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000281 ISS mitotic cytokinesis
GO:0005768 IBA endosome
GO:0005829 IEA cytosol
GO:0006886 IBA intracellular protein transport
GO:0006897 ISS endocytosis
GO:0007032 ISS endosome organization
GO:0007067 IEA mitotic nuclear division
GO:0016020 IEA membrane
GO:0016023 ISS cytoplasmic membrane-bounded vesicle
GO:0016197 ISS endosomal transport
GO:0017038 IEA protein import
GO:0019898 ISS extrinsic component of membrane
GO:0035091 IBA phosphatidylinositol binding
GO:0036089 ISS cleavage furrow formation
GO:0042802 IEA identical protein binding
GO:0044351 ISS macropinocytosis
GO:0045806 IEA negative regulation of endocytosis
GO:0051044 IEA positive regulation of membrane protein ectodomain proteolysis
GO:0097320 ISS membrane tubulation
GO:2000009 IEA negative regulation of protein localization to cell surface
GO:2000010 IEA positive regulation of protein localization to cell surface

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308527 SNX33-001 protein_coding Homo_sapiens 0 2357
ENST00000569152 SNX33-002 protein_coding Homo_sapiens 0 695

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