C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline rich 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051395 Prr11-001 ENSMUSG00000020493 10090 - 11:87089153-87108708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051395
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051395 0.751±0.38 0.175±0.13 0.333±0.06 1.596±1.24 0.342±0.18 0.893±0.14 0.150±0.06 0.089±0.05 3.715±4.34 0.327±0.10 0.064±0.03 1.353±0.47 2.265±1.68 2.774±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039L CIL_00039L_0002 CGP 11:87077732-87108708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262293 PRR11-001 protein_coding Homo_sapiens 0 870
ENST00000578542 PRR11-003 nonsense_mediated_decay Homo_sapiens 0 861
ENST00000580177 PRR11-002 nonsense_mediated_decay Homo_sapiens 0 850
ENST00000581182 PRR11-009 retained_intron Homo_sapiens 0 220
ENST00000614081 PRR11-201 protein_coding Homo_sapiens 0 850

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