C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome alignment maintaining phosphoprotein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051870 Champ1-001 ENSMUSG00000047710 10090 + 8:13869641-13881639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051870
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051870 4.306±1.70 8.171±1.30 6.487±0.23 11.440±2.25 3.799±0.93 3.841±0.65 1.638±0.18 4.674±0.57 3.801±2.40 4.607±0.44 1.627±0.14 7.280±1.35 5.415±1.91 3.197±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VU CIL_0007VU_0002 VISTA 8:13771980-14374029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000777 ISS condensed chromosome kinetochore
GO:0000793 ISS condensed chromosome
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005819 ISS spindle
GO:0031134 ISS sister chromatid biorientation
GO:0034501 ISS protein localization to kinetochore
GO:0035372 ISS protein localization to microtubule
GO:0046872 IEA metal ion binding
GO:0051315 ISS attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361283 CHAMP1-001 protein_coding Homo_sapiens 0 1620

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