C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052236 Fbxo10-001 ENSMUSG00000048232 10090 - 4:45034247-45084604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052236 3.043±1.52 2.949±2.07 4.731±0.33 7.559±2.94 1.613±0.45 1.677±0.72 3.968±0.56 4.440±0.96 1.781±1.68 4.534±0.89 0.779±0.18 10.063±4.17 4.149±2.43 1.187±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000843 CIL_000843_0002 VISTA 4:44530265-45131018
CIL_0008YP CIL_0008YP_0002 VISTA 4:44551630-45152605
CIL_00080S CIL_00080S_0002 VISTA 4:44617363-45218981
CIL_0001OS CIL_0001OS_0002 CGP 4:44991242-45036565
CIL_00039W CIL_00039W_0002 CGP 4:45018583-45084604

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0006915 IEA apoptotic process
GO:0042787 IEA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0042981 IEA regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276960 FBXO10-002 nonsense_mediated_decay Homo_sapiens 0 2069
ENST00000432825 FBXO10-001 protein_coding Homo_sapiens 0 3386
ENST00000541804 RP11-613M10.8-003 processed_transcript Homo_sapiens 0 1659
ENST00000543968 FBXO10-004 processed_transcript Homo_sapiens 0 608
ENST00000544475 RP11-613M10.8-002 processed_transcript Homo_sapiens 0 3356

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