C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00039W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137054-ENSG00000147912 CGP 9606 9:37485935-37576349
GeneTranscriptPositionBiotype
ENSG00000137054 (POLR1E)
polymerase (RNA) I polypeptide E, 53kDa
ENST00000377792 (POLR1E-002) 37486153-37503697 protein_coding
ENST00000377798 (POLR1E-001) 37485935-37503697 protein_coding
ENST00000442009 (POLR1E-201) 37485935-37503696 protein_coding
ENSG00000230188 (RP11-405L18.4)
ENST00000422509 (RP11-405L18.4-001) 37490421-37490893 processed_pseudogene
ENSG00000234160 (RP11-613M10.6)
ENST00000413915 (RP11-613M10.6-001) 37509150-37510299 antisense
CIL_00039W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028318-ENSMUSG00000048232 CGP 10090 4:45018583-45084604
GeneTranscriptPositionBiotype
ENSMUSG00000028318 (Polr1e)
polymerase (RNA) I polypeptide E
ENSMUST00000029999 (Polr1e-003) 45018662-45032365 protein_coding
ENSMUST00000054723 (Polr1e-005) 45019235-45032112 protein_coding
ENSMUST00000107814 (Polr1e-002) 45018663-45036565 protein_coding
ENSMUST00000133157 (Polr1e-001) 45018583-45033692 protein_coding
ENSMUST00000149284 (Polr1e-004) 45018697-45026870 processed_transcript
ENSMUST00000150663 (Polr1e-006) 45029144-45031385 processed_transcript
ENSMUST00000153252 (Polr1e-007) 45031262-45032360 processed_transcript
ENSMUSG00000048232 (Fbxo10)
F-box protein 10
ENSMUST00000052236 (Fbxo10-001) 45034247-45084604 protein_coding
ENSMUST00000140008 (Fbxo10-002) 45034248-45062004 protein_coding
ENSMUST00000155583 (Fbxo10-003) 45046288-45058618 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039W_0001ENSG00000137054ENST00000377792ENST00000377798ENST00000442009ENSG00000230188ENST00000422509ENSG00000234160ENST00000413915CIL_00039W_0002ENSMUSG00000028318ENSMUST00000029999ENSMUST00000054723ENSMUST00000107814ENSMUST00000133157ENSMUST00000149284ENSMUST00000150663ENSMUST00000153252ENSMUSG00000048232ENSMUST00000052236ENSMUST00000140008ENSMUST00000155583
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039W_0001ENSG00000137054ENST00000377792ENST00000377798ENST00000442009ENSG00000230188ENST00000422509ENSG00000234160ENST00000413915CIL_00039W_0002ENSMUSG00000028318ENSMUST00000029999ENSMUST00000054723ENSMUST00000107814ENSMUST00000133157ENSMUST00000149284ENSMUST00000150663ENSMUST00000153252ENSMUSG00000048232ENSMUST00000052236ENSMUST00000140008
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137054 ENST00000377792 N/A N/A N/A N/A 1.391±0.00 1.030±0.00 N/A N/A N/A 0.759±0.00 N/A 1.419±0.00 N/A N/A
ENST00000377798 5.069±0.00 8.715±0.00 1.087±0.00 4.729±1.75 5.266±4.33 7.214±4.46 2.339±1.43 3.188±0.55 5.533±1.39 5.782±4.17 6.421±4.26 10.619±5.15 6.699±0.72 8.081±2.94
ENST00000442009 N/A N/A N/A N/A N/A N/A N/A 0.507±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000230188 ENST00000422509 0.057±0.00 0.061±0.00 N/A 0.059±0.00 N/A 0.835±0.00 N/A N/A 0.081±0.00 0.336±0.00 0.215±0.00 0.189±0.00 0.117±0.00 0.079±0.00
ENSG00000234160 ENST00000413915 2.146±0.00 4.462±0.00 N/A 2.505±0.00 5.207±0.00 N/A N/A N/A N/A 1.940±1.58 N/A N/A 0.280±0.00 3.085±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028318 ENSMUST00000029999 1.669±0.44 2.166±1.18 1.772±0.21 N/A 1.519±0.02 1.687±0.51 3.692±0.59 1.810±0.54 1.049±0.65 N/A 0.414±0.20 4.174±0.00 3.358±2.47 0.980±0.26
ENSMUST00000054723 N/A N/A 1.680±0.78 2.566±0.00 1.161±0.00 N/A N/A N/A 2.552±1.68 N/A 0.903±0.31 4.704±2.17 4.307±3.29 1.809±0.45
ENSMUST00000107814 0.818±0.00 2.536±1.32 1.147±0.36 3.313±0.33 1.584±0.64 1.842±0.85 2.281±0.71 1.155±0.21 0.798±0.27 1.456±0.24 0.400±0.02 2.691±1.01 2.365±0.04 1.685±0.97
ENSMUST00000133157 0.928±0.26 N/A 0.981±0.15 1.675±0.96 1.230±0.59 1.089±0.47 1.007±0.14 0.837±0.53 0.844±0.64 0.799±0.19 0.205±0.07 2.840±1.93 0.375±0.00 1.303±0.19
ENSMUST00000149284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.077±0.00 N/A N/A
ENSMUST00000150663 N/A N/A N/A N/A N/A 2.303±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153252 N/A N/A N/A 1.645±0.00 N/A N/A N/A N/A 4.647±0.00 N/A 0.718±0.17 4.531±1.56 5.091±1.85 0.501±0.00
ENSMUSG00000048232 ENSMUST00000052236 3.043±1.52 2.949±2.07 4.731±0.33 7.559±2.94 1.613±0.45 1.677±0.72 3.968±0.56 4.440±0.96 1.781±1.68 4.534±0.89 0.779±0.18 10.063±4.17 4.149±2.43 1.187±0.56
ENSMUST00000140008 N/A N/A N/A 5.276±0.00 N/A N/A 0.914±0.00 1.908±0.03 0.173±0.00 N/A 0.221±0.00 4.034±0.00 2.332±0.09 0.256±0.00
ENSMUST00000155583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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