C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052355 Nup37-201 ENSMUSG00000035351 10090 + 10:88146992-88178388 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052355
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052355 3.685±0.97 1.301±0.27 6.613±1.12 8.484±2.26 2.737±1.63 1.185±0.55 2.164±0.19 3.059±0.55 9.231±8.52 1.668±0.54 2.031±0.37 3.798±1.36 9.789±5.75 6.544±3.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WS CIL_0008WS_0002 VISTA 10:87568234-88170738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007059 IEA chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0015031 IEA protein transport
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251074 NUP37-201 protein_coding Homo_sapiens 0 1206
ENST00000543021 NUP37-003 processed_transcript Homo_sapiens 0 695
ENST00000547269 NUP37-006 nonsense_mediated_decay Homo_sapiens 0 512
ENST00000551200 NUP37-002 retained_intron Homo_sapiens 0 926
ENST00000551744 NUP37-008 protein_coding Homo_sapiens 0 582
ENST00000552283 NUP37-001 protein_coding Homo_sapiens 0 1206

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